Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   QHG52_RS03335 Genome accession   NZ_CP123912
Coordinates   709604..709987 (+) Length   127 a.a.
NCBI ID   WP_004827613.1    Uniprot ID   A0A0A8TKL3
Organism   Acinetobacter bereziniae strain UCO-553     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 704604..714987
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QHG52_RS03320 - 705312..706271 (+) 960 WP_005031091.1 DUF6160 family protein -
  QHG52_RS03325 - 706699..708429 (-) 1731 WP_005031090.1 proline--tRNA ligase -
  QHG52_RS03330 - 708678..709319 (-) 642 WP_042066450.1 hypothetical protein -
  QHG52_RS03335 pilG 709604..709987 (+) 384 WP_004827613.1 twitching motility response regulator PilG Regulator
  QHG52_RS03340 - 710008..710376 (+) 369 WP_004827615.1 response regulator -
  QHG52_RS03345 - 710380..710916 (+) 537 WP_004827616.1 chemotaxis protein CheW -
  QHG52_RS03350 - 710959..713028 (+) 2070 WP_004827618.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14213.27 Da        Isoelectric Point: 4.7172

>NTDB_id=823066 QHG52_RS03335 WP_004827613.1 709604..709987(+) (pilG) [Acinetobacter bereziniae strain UCO-553]
MDDKFQNLKVMVIDDSKTIRRTAETLLQREGCEVVTAVDGFEALSKIAEANPDIVFVDIMMPRLDGYQTCALIKNSQNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHVSA

Nucleotide


Download         Length: 384 bp        

>NTDB_id=823066 QHG52_RS03335 WP_004827613.1 709604..709987(+) (pilG) [Acinetobacter bereziniae strain UCO-553]
ATGGACGATAAATTTCAAAATCTTAAAGTCATGGTGATCGATGATTCTAAAACCATTCGTCGTACTGCTGAAACATTATT
ACAAAGAGAAGGTTGTGAAGTAGTTACTGCGGTAGATGGTTTTGAAGCCTTGTCTAAGATTGCTGAAGCTAATCCAGATA
TCGTTTTTGTTGATATTATGATGCCTCGTTTGGATGGTTATCAAACCTGTGCATTGATTAAAAATTCTCAAAATTATCAA
AATATTCCAGTCATTATGCTATCAAGCAAAGATGGCTTATTTGATCAAGCAAAGGGTCGCGTTGTCGGTTCTGATGAATA
TTTAACCAAACCATTTAGTAAAGATGAATTATTGAATGCAATTCGCAACCATGTGAGTGCATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0A8TKL3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

96.85

100

0.969
  vicR Streptococcus mutans UA159

41.88

92.126

0.386
  pilH Synechocystis sp. PCC 6803

41.593

88.976

0.37