Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   QFB56_RS03655 Genome accession   NZ_CP123765
Coordinates   731309..731692 (+) Length   127 a.a.
NCBI ID   WP_000389061.1    Uniprot ID   -
Organism   Acinetobacter pittii strain AP8900     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 726309..736692
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QFB56_RS03645 (QFB56_03645) nolF 729208..730317 (-) 1110 WP_080776822.1 efflux RND transporter periplasmic adaptor subunit -
  QFB56_RS03650 (QFB56_03650) - 730386..731024 (-) 639 WP_017400247.1 hypothetical protein -
  QFB56_RS03655 (QFB56_03655) pilG 731309..731692 (+) 384 WP_000389061.1 twitching motility response regulator PilG Regulator
  QFB56_RS03660 (QFB56_03660) pilH 731715..732077 (+) 363 WP_002116220.1 response regulator -
  QFB56_RS03665 (QFB56_03665) pilI 732138..732674 (+) 537 WP_002116439.1 chemotaxis protein CheW -
  QFB56_RS03670 (QFB56_03670) pilJ 732717..734795 (+) 2079 WP_005072794.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14200.23 Da        Isoelectric Point: 4.5762

>NTDB_id=822611 QFB56_RS03655 WP_000389061.1 731309..731692(+) (pilG) [Acinetobacter pittii strain AP8900]
MEDAFQNLKVMVIDDSKTIRRTAETLLQREGCEVITAVDGFEALSKIAEANPDIVFVDIMMPRLDGYQTCALIKNSQNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHVSS

Nucleotide


Download         Length: 384 bp        

>NTDB_id=822611 QFB56_RS03655 WP_000389061.1 731309..731692(+) (pilG) [Acinetobacter pittii strain AP8900]
ATGGAAGATGCATTCCAAAATCTGAAAGTAATGGTGATTGATGACTCAAAAACCATTCGCCGTACAGCAGAAACCTTATT
ACAGCGTGAAGGCTGTGAAGTCATTACTGCTGTGGATGGATTTGAAGCTTTGTCCAAAATTGCAGAAGCAAATCCGGATA
TTGTTTTTGTCGATATCATGATGCCTCGTTTAGATGGTTATCAAACTTGTGCTTTGATAAAAAACTCTCAAAATTATCAG
AATATTCCCGTTATCATGCTCTCTAGTAAAGATGGTTTATTTGATCAGGCAAAAGGGCGTGTGGTAGGTTCAGATGAATA
CTTGACGAAACCTTTTAGCAAAGATGAATTGTTAAACGCGATTCGTAATCATGTAAGTTCATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

100

100

1
  vicR Streptococcus mutans UA159

42.735

92.126

0.394
  pilH Synechocystis sp. PCC 6803

41.593

88.976

0.37