Detailed information NTG0822064

Bioinformatically predicted

Overview

• Name: comGC
• Type: Machinery gene
• Locus tag: QFX50_RS11115
• Genome accession: NZ_CP123740
• Coordinates: 2282803..2283114 (-)
• Length: 103 a.a.
• NCBI ID: WP_000472256.1
• Uniprot ID: -
• Organism: Staphylococcus aureus strain 2.3b
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2277803..2288114

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QFX50_RS11080	gcvPA	2278305..2279651 (-)	1347	WP_000019687.1	aminomethyl-transferring glycine dehydrogenase subunit GcvPA	-
QFX50_RS11085	gcvT	2279671..2280762 (-)	1092	WP_000093349.1	glycine cleavage system aminomethyltransferase GcvT	-
QFX50_RS11090	-	2280921..2281445 (-)	525	WP_001015119.1	shikimate kinase	-
QFX50_RS11095	-	2281435..2281581 (-)	147	WP_001789879.1	hypothetical protein	-
QFX50_RS11100	comGF	2281678..2282175 (-)	498	WP_029642894.1	competence type IV pilus minor pilin ComGF	Machinery gene
QFX50_RS11105	comGE	2282093..2282392 (-)	300	WP_000844413.1	hypothetical protein	Machinery gene
QFX50_RS11110	comGD	2282379..2282825 (-)	447	WP_001788899.1	competence type IV pilus minor pilin ComGD	Machinery gene
QFX50_RS11115	comGC	2282803..2283114 (-)	312	WP_000472256.1	competence type IV pilus major pilin ComGC	Machinery gene
QFX50_RS11120	comGB	2283128..2284198 (-)	1071	WP_000776422.1	competence type IV pilus assembly protein ComGB	Machinery gene
QFX50_RS11125	comGA	2284170..2285144 (-)	975	WP_000697220.1	competence type IV pilus ATPase ComGA	Machinery gene
QFX50_RS11130	-	2285196..2285819 (-)	624	WP_001223008.1	MBL fold metallo-hydrolase	-
QFX50_RS11135	-	2285816..2286145 (-)	330	WP_304984508.1	MTH1187 family thiamine-binding protein	-
QFX50_RS11140	-	2286145..2287131 (-)	987	WP_000161314.1	ROK family glucokinase	-
QFX50_RS11145	-	2287128..2287331 (-)	204	WP_000087561.1	YqgQ family protein	-

Sequence

Protein

• Length: 103 a.a.
• Molecular weight: 11315.36 Da
• Isoelectric Point: 8.5268

>NTDB_id=822064 QFX50_RS11115 WP_000472256.1 2282803..2283114(-) (comGC) [Staphylococcus aureus strain 2.3b]
MFKFLKKTQAFTLIEMLLVLLIISLLLILIIPNIAKQTAHIQSTGCNAQVKMVNSQIEAYALKHNRNPSSIEDLIADGFI
KEAQKTCKSGETITISNGEAVAN

Nucleotide

• Length: 312 bp

>NTDB_id=822064 QFX50_RS11115 WP_000472256.1 2282803..2283114(-) (comGC) [Staphylococcus aureus strain 2.3b]
ATGTTTAAATTTCTTAAGAAAACTCAAGCGTTTACATTGATAGAGATGCTATTAGTGTTATTAATCATCAGTTTATTATT
AATTTTAATCATTCCAAATATTGCTAAACAAACTGCTCACATACAATCAACAGGTTGTAATGCACAGGTAAAAATGGTTA
ATAGTCAAATTGAAGCGTATGCATTGAAACATAATAGAAATCCATCGTCTATTGAAGACTTAATTGCAGATGGTTTTATA
AAAGAAGCACAAAAGACATGTAAATCAGGAGAGACAATAACAATTAGTAATGGAGAAGCAGTTGCAAATTAG

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (6-30)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGC	Staphylococcus aureus MW2	100	100	1
comGC	Staphylococcus aureus N315	100	100	1
comGC/cglC	Streptococcus pneumoniae TIGR4	46.078	99.029	0.456
comGC/cglC	Streptococcus pneumoniae Rx1	46.078	99.029	0.456
comGC/cglC	Streptococcus pneumoniae D39	46.078	99.029	0.456
comGC/cglC	Streptococcus pneumoniae R6	46.078	99.029	0.456
comGC/cglC	Streptococcus mitis SK321	51.163	83.495	0.427
comGC/cglC	Streptococcus mitis NCTC 12261	51.163	83.495	0.427
comYC	Streptococcus gordonii str. Challis substr. CH1	42.857	95.146	0.408
comYC	Streptococcus suis isolate S10	50	75.728	0.379
comGC	Bacillus subtilis subsp. subtilis str. 168	41.758	88.35	0.369
comGC	Lactococcus lactis subsp. cremoris KW2	46.341	79.612	0.369