Detailed information    

insolico Bioinformatically predicted

Overview

Name   braS   Type   Regulator
Locus tag   QFX56_RS13330 Genome accession   NZ_CP123738
Coordinates   2652026..2652913 (-) Length   295 a.a.
NCBI ID   WP_000143416.1    Uniprot ID   -
Organism   Staphylococcus aureus strain 2.6     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2647026..2657913
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QFX56_RS13300 - 2647052..2647135 (+) 84 WP_031797553.1 hypothetical protein -
  QFX56_RS13305 - 2647243..2647740 (-) 498 WP_001065267.1 glutathione peroxidase -
  QFX56_RS13310 - 2647750..2648010 (-) 261 WP_001789910.1 hypothetical protein -
  QFX56_RS13315 - 2648392..2648505 (-) 114 WP_011447078.1 hypothetical protein -
  QFX56_RS13320 - 2649166..2651166 (-) 2001 WP_000776738.1 ABC transporter permease -
  QFX56_RS13325 - 2651163..2651918 (-) 756 WP_000923760.1 ABC transporter ATP-binding protein -
  QFX56_RS13330 braS 2652026..2652913 (-) 888 WP_000143416.1 nisin susceptibility-associated two-component system sensor histidine kinase NsaS Regulator
  QFX56_RS13335 braR 2652924..2653589 (-) 666 WP_000697886.1 nisin susceptibility-associated two-component system response regulator NsaR Regulator
  QFX56_RS13340 - 2653615..2653815 (-) 201 WP_000604728.1 hypothetical protein -
  QFX56_RS13345 - 2654013..2655437 (+) 1425 WP_000953744.1 alkaline phosphatase -
  QFX56_RS13850 - 2655497..2655598 (-) 102 WP_000731972.1 SE2200 family small protein -
  QFX56_RS13355 - 2655720..2656175 (-) 456 WP_000106185.1 MarR family winged helix-turn-helix transcriptional regulator -
  QFX56_RS13360 - 2656420..2657181 (-) 762 WP_000323456.1 alpha/beta hydrolase family protein -

Sequence

Protein


Download         Length: 295 a.a.        Molecular weight: 34020.27 Da        Isoelectric Point: 5.8482

>NTDB_id=821995 QFX56_RS13330 WP_000143416.1 2652026..2652913(-) (braS) [Staphylococcus aureus strain 2.6]
MTFLKSITQEIAIVIVIFALFGLMFYLYHLPLEAYLLALGVILLLLLIFIGIKYLSFVKTISQQQQIENLENALYQLKNE
QIEYKNDVESYFLTWVHQMKTPITAAQLLLERDEPNVVNRVRQEVIQIDNYTSLALSYLKLLNETSDISVTKISINDIIR
PIIMKYSIQFIDQKTKIHYEPCHHEVLTDVRWTSLMIEQLINNALKYARGKDIWIEFDEQSNQLHVKDNGIGISEADLPK
IFDKGYSGYNGQRQSNSSGIGLFIVKQISTHTNHPVSVVSKQNEGTTFTIQFPDE

Nucleotide


Download         Length: 888 bp        

>NTDB_id=821995 QFX56_RS13330 WP_000143416.1 2652026..2652913(-) (braS) [Staphylococcus aureus strain 2.6]
ATGACCTTTCTTAAAAGTATTACTCAGGAAATAGCAATAGTCATAGTTATTTTTGCTTTGTTTGGCTTAATGTTTTACCT
GTATCATTTGCCATTAGAAGCATATTTACTAGCACTTGGCGTTATTTTATTATTATTACTCATATTCATAGGTATTAAAT
ATTTAAGTTTTGTAAAAACTATAAGCCAACAACAACAAATTGAAAACTTAGAAAATGCGTTGTATCAGCTTAAAAATGAA
CAAATTGAATATAAAAATGATGTAGAGAGCTACTTTTTAACATGGGTACATCAAATGAAAACACCCATTACTGCAGCACA
ACTGTTACTTGAAAGAGATGAGCCTAATGTTGTTAATCGTGTTCGTCAAGAGGTTATTCAAATTGATAACTATACAAGTT
TAGCACTTAGTTATTTAAAGTTATTAAATGAAACTTCTGATATTTCTGTCACTAAAATTTCGATTAATGATATCATTCGC
CCAATTATTATGAAATATTCAATACAGTTTATTGATCAAAAAACAAAAATCCATTATGAACCTTGTCATCACGAAGTATT
AACTGACGTTAGATGGACCTCTTTAATGATAGAACAATTAATAAATAATGCACTTAAGTATGCGAGAGGTAAAGATATAT
GGATTGAATTTGATGAGCAATCCAATCAATTACACGTAAAAGATAATGGTATCGGTATTAGTGAAGCGGACTTGCCTAAA
ATATTTGATAAGGGCTATTCAGGTTATAATGGCCAGCGCCAAAGTAACTCAAGTGGGATTGGTTTATTTATCGTAAAACA
AATTTCAACACACACAAACCATCCTGTTTCAGTCGTATCTAAACAAAATGAGGGTACAACATTTACGATTCAATTTCCAG
ATGAATAA

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(191-294)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

99.322

100

0.993