Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   P7V53_RS05710 Genome accession   NZ_CP123228
Coordinates   1195951..1196343 (+) Length   130 a.a.
NCBI ID   WP_280156445.1    Uniprot ID   -
Organism   Piscinibacter sp. XHJ-5     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1190951..1201343
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P7V53_RS05685 - 1192387..1192833 (+) 447 WP_280154510.1 hypothetical protein -
  P7V53_RS05690 - 1192844..1193314 (+) 471 WP_280154511.1 DUF6152 family protein -
  P7V53_RS05695 hemL 1193324..1194610 (-) 1287 WP_280154512.1 glutamate-1-semialdehyde 2,1-aminomutase -
  P7V53_RS05700 - 1194615..1195541 (-) 927 WP_280154513.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase -
  P7V53_RS05705 - 1195714..1195887 (+) 174 WP_280154514.1 rubredoxin -
  P7V53_RS05710 pilG 1195951..1196343 (+) 393 WP_280156445.1 response regulator Regulator
  P7V53_RS05715 - 1196464..1196844 (+) 381 WP_280154515.1 response regulator -
  P7V53_RS05720 - 1196867..1197388 (+) 522 WP_280154516.1 chemotaxis protein CheW -
  P7V53_RS05725 - 1197481..1199814 (+) 2334 WP_280154517.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 130 a.a.        Molecular weight: 14536.79 Da        Isoelectric Point: 7.8517

>NTDB_id=820097 P7V53_RS05710 WP_280156445.1 1195951..1196343(+) (pilG) [Piscinibacter sp. XHJ-5]
MEAPANAPGVKVLVIDDSNTIRRSAEIFLKQGGYQVLLAEDGFDALSKVNDHEPDLIFCDILMPRLDGYQTCAIIKRNVK
FKNVPVIMLSSKDGLFDKARGRMVGSQDYLTKPFTKDQLLQAVEQHRRAA

Nucleotide


Download         Length: 393 bp        

>NTDB_id=820097 P7V53_RS05710 WP_280156445.1 1195951..1196343(+) (pilG) [Piscinibacter sp. XHJ-5]
ATTGAAGCCCCCGCCAACGCACCGGGCGTGAAGGTGCTGGTCATCGATGACAGCAACACCATCCGCCGCAGCGCGGAGAT
CTTTTTGAAGCAGGGTGGCTACCAGGTGCTGCTCGCCGAGGACGGCTTCGACGCGCTGTCCAAGGTCAACGACCACGAGC
CCGATCTCATCTTCTGCGACATCCTCATGCCGCGGCTGGACGGCTACCAGACGTGCGCCATCATCAAGCGCAACGTCAAG
TTCAAGAACGTGCCGGTGATCATGCTCTCGTCCAAGGACGGCCTGTTCGACAAGGCGCGCGGCCGCATGGTCGGATCGCA
GGACTACCTCACCAAACCGTTCACCAAAGACCAACTGTTGCAGGCGGTGGAGCAGCATCGCCGCGCGGCGTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(12-124)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

62.712

90.769

0.569
  pilH Synechocystis sp. PCC 6803

43.59

90

0.392
  vicR Streptococcus mutans UA159

41.525

90.769

0.377