Detailed information NTG0081998

Bioinformatically predicted

Overview

• Name: comR
• Type: Regulator
• Locus tag: R8613_RS09850
• Genome accession: NZ_AP026919
• Coordinates: 1885869..1886780 (-)
• Length: 303 a.a.
• NCBI ID: WP_000904854.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain PZ900700012
• Function: activate transcription of comX (predicted from homology) Competence regulation

Genomic Context

Location: 1880869..1891780

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R8613_RS09825 (PC0012_19070)	rsmA	1881199..1882071 (-)	873	WP_001216870.1	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	-
R8613_RS09830 (PC0012_19080)	-	1882202..1882510 (-)	309	WP_000333257.1	hypothetical protein	-
R8613_RS09835 (PC0012_19090)	-	1882503..1883144 (-)	642	WP_000565533.1	ABC transporter ATP-binding protein	-
R8613_RS09840 (PC0012_19100)	-	1883146..1885176 (-)	2031	WP_000825259.1	bacteriocin-associated integral membrane family protein	-
R8613_RS09845 (PC0012_19110)	-	1885253..1885549 (-)	297	WP_000815394.1	lactococcin 972 family bacteriocin	-
R8613_RS09850 (PC0012_19120)	comR	1885869..1886780 (-)	912	WP_000904854.1	XRE family transcriptional regulator	Regulator
R8613_RS09855 (PC0012_19130)	rnmV	1886852..1887412 (-)	561	WP_000660009.1	ribonuclease M5	-
R8613_RS09860 (PC0012_19140)	-	1887412..1888185 (-)	774	WP_317648247.1	TatD family hydrolase	-
R8613_RS09865 (PC0012_19150)	-	1888490..1889197 (-)	708	Protein_1940	DUF1542 domain-containing protein	-
R8613_RS09870 (PC0012_19160)	rpmH	1889406..1889540 (-)	135	WP_000831905.1	50S ribosomal protein L34	-
R8613_RS09875 (PC0012_19170)	-	1889685..1890899 (-)	1215	WP_000666469.1	pyridoxal phosphate-dependent aminotransferase	-
R8613_RS09880 (PC0012_19180)	-	1891055..1891360 (-)	306	WP_025173140.1	hypothetical protein	-

Sequence

Protein

• Length: 303 a.a.
• Molecular weight: 35509.76 Da
• Isoelectric Point: 4.4509

>NTDB_id=81998 R8613_RS09850 WP_000904854.1 1885869..1886780(-) (comR) [Streptococcus pneumoniae strain PZ900700012]
MLIGQKIKEIRIEKGISRPDFCGDEQELTVRQLSRIESGASQPSLPKLDYIARRLGVPVYSLMPDFSALPSAYLELKYQI
LREPIYDKEEEYDKKEACLEEIEDLFYEQLPNEEKVWFEATRATIDVIRSGQPEYGETVLDDYFKTIYDKELFLINELEV
INLYFAIVLTKIKQGQNQIEEINRIHSFLVRLTNHVELIAPEYLFALSNTLFSGLACLDNLSSYDSLGAYIFSLNHIMEK
TQDFQKKPIILMLEWKLSLIINNDYVSAEQFYQKSKLFADIIENSYLVTMLEKQWQEDLKKYL

Nucleotide

• Length: 912 bp

>NTDB_id=81998 R8613_RS09850 WP_000904854.1 1885869..1886780(-) (comR) [Streptococcus pneumoniae strain PZ900700012]
ATGTTAATTGGTCAAAAAATTAAAGAGATTCGGATAGAAAAAGGAATTAGTCGTCCAGATTTTTGTGGAGATGAGCAAGA
ACTGACAGTTCGTCAACTGTCGCGAATTGAAAGTGGAGCTTCGCAACCGAGTTTGCCCAAGTTAGACTATATTGCTCGCC
GGCTAGGAGTTCCAGTTTATAGCCTTATGCCGGATTTTTCAGCTCTTCCTTCTGCTTATTTAGAATTGAAATACCAGATT
TTACGTGAACCAATCTATGATAAAGAAGAGGAGTATGATAAGAAAGAAGCGTGTTTGGAAGAGATAGAGGATTTATTTTA
TGAGCAACTTCCTAATGAGGAGAAAGTATGGTTTGAAGCTACTAGAGCAACGATAGATGTTATTCGAAGCGGACAACCAG
AATACGGGGAAACCGTACTGGACGATTATTTTAAAACAATTTATGATAAGGAATTGTTTTTGATAAATGAATTAGAAGTT
ATCAACTTATATTTTGCTATAGTGCTTACAAAGATAAAACAAGGTCAAAATCAGATTGAAGAAATTAACAGAATTCATTC
GTTTTTAGTTCGTTTGACAAATCATGTAGAATTAATTGCACCAGAATATCTGTTTGCTTTAAGTAACACTTTGTTTTCGG
GTCTAGCCTGTTTGGATAATTTGTCGTCTTATGATTCACTAGGAGCTTATATCTTTAGCCTTAATCATATAATGGAAAAA
ACACAAGATTTCCAGAAGAAACCAATTATATTAATGTTGGAGTGGAAATTATCTCTAATAATAAACAATGATTATGTTTC
TGCCGAACAGTTCTATCAGAAATCGAAGCTATTTGCTGATATAATAGAAAATTCTTATTTAGTTACTATGTTAGAAAAAC
AATGGCAAGAAGATTTAAAAAAATATTTATAA

Domains

Predicted by InterProScan.

• ComR tetratricopeptide (ComR_TPR) (70-295)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR	Streptococcus mutans UA159	38.851	97.69	0.38
comR	Streptococcus pyogenes MGAS8232	37.5	100	0.376
comR	Streptococcus suis P1/7	37.288	97.36	0.363
comR	Streptococcus suis 05ZYH33	37.288	97.36	0.363