Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | QAY77_RS01635 | Genome accession | NZ_CP123162 |
| Coordinates | 362459..362962 (+) | Length | 167 a.a. |
| NCBI ID | WP_000934799.1 | Uniprot ID | A0A7U7IE99 |
| Organism | Staphylococcus aureus strain BE-MSSA7 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 358396..383941 | 362459..362962 | within | 0 |
Gene organization within MGE regions
Location: 358396..383941
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QAY77_RS01605 (QAY77_01600) | - | 358396..359241 (+) | 846 | WP_411888742.1 | ParB/RepB/Spo0J family partition protein | - |
| QAY77_RS01610 (QAY77_01605) | - | 359398..360279 (+) | 882 | WP_001077602.1 | mechanosensitive ion channel family protein | - |
| QAY77_RS01615 (QAY77_01610) | - | 360309..360512 (+) | 204 | WP_000157345.1 | DUF951 domain-containing protein | - |
| QAY77_RS01620 (QAY77_01615) | ychF | 360524..361621 (+) | 1098 | WP_001218732.1 | redox-regulated ATPase YchF | - |
| QAY77_RS01625 (QAY77_01620) | - | 361707..361898 (-) | 192 | WP_001052483.1 | hypothetical protein | - |
| QAY77_RS01630 (QAY77_01625) | rpsF | 362142..362438 (+) | 297 | WP_001261460.1 | 30S ribosomal protein S6 | - |
| QAY77_RS01635 (QAY77_01630) | ssbA | 362459..362962 (+) | 504 | WP_000934799.1 | single-stranded DNA-binding protein | Machinery gene |
| QAY77_RS01640 (QAY77_01635) | rpsR | 363014..363256 (+) | 243 | WP_000897044.1 | 30S ribosomal protein S18 | - |
| QAY77_RS01645 (QAY77_01640) | - | 363438..364268 (-) | 831 | WP_000357934.1 | KilA-N domain-containing protein | - |
| QAY77_RS01650 (QAY77_01645) | - | 364751..365968 (-) | 1218 | WP_411888743.1 | tyrosine-type recombinase/integrase | - |
| QAY77_RS01655 (QAY77_01650) | - | 366231..366956 (-) | 726 | WP_000668215.1 | helix-turn-helix domain-containing protein | - |
| QAY77_RS01660 (QAY77_01655) | - | 367128..367340 (+) | 213 | WP_001245562.1 | helix-turn-helix domain-containing protein | - |
| QAY77_RS01665 (QAY77_01660) | - | 367341..367613 (+) | 273 | WP_001138300.1 | helix-turn-helix domain-containing protein | - |
| QAY77_RS01670 (QAY77_01665) | - | 367625..367780 (+) | 156 | WP_000784886.1 | hypothetical protein | - |
| QAY77_RS01675 (QAY77_01670) | - | 367765..368010 (+) | 246 | WP_001171847.1 | hypothetical protein | - |
| QAY77_RS01680 (QAY77_01675) | - | 367970..368353 (+) | 384 | WP_000403843.1 | hypothetical protein | - |
| QAY77_RS01685 (QAY77_01680) | tscT | 368354..368653 (+) | 300 | WP_031904328.1 | type II toxin-antitoxin system toxin TscT | - |
| QAY77_RS01690 (QAY77_01685) | - | 368728..370344 (+) | 1617 | WP_411888744.1 | phage resistance protein | - |
| QAY77_RS01695 (QAY77_01690) | - | 370520..371323 (+) | 804 | WP_000148373.1 | bifunctional DNA primase/polymerase | - |
| QAY77_RS01700 (QAY77_01695) | - | 371584..372225 (+) | 642 | WP_264008371.1 | pathogenicity island protein | - |
| QAY77_RS01705 (QAY77_01700) | - | 372675..373016 (+) | 342 | WP_001190599.1 | hypothetical protein | - |
| QAY77_RS01710 (QAY77_01705) | - | 373028..373606 (+) | 579 | WP_000846292.1 | hypothetical protein | - |
| QAY77_RS01715 (QAY77_01710) | - | 373624..373842 (+) | 219 | WP_000448775.1 | capsid morphogenesis B protein | - |
| QAY77_RS01720 (QAY77_01715) | - | 373893..374420 (+) | 528 | WP_000771356.1 | spore coat protein | - |
| QAY77_RS01725 (QAY77_01720) | - | 374423..374764 (+) | 342 | WP_000358778.1 | hypothetical protein | - |
| QAY77_RS01730 (QAY77_01725) | - | 374761..375330 (+) | 570 | WP_001293072.1 | terminase small subunit | - |
| QAY77_RS01735 (QAY77_01730) | - | 375405..375764 (-) | 360 | WP_000935290.1 | hypothetical protein | - |
| QAY77_RS01740 (QAY77_01735) | - | 375881..376270 (-) | 390 | WP_000362902.1 | hypothetical protein | - |
| QAY77_RS01745 (QAY77_01740) | - | 376272..377483 (-) | 1212 | WP_009558370.1 | hypothetical protein | - |
| QAY77_RS01750 (QAY77_01745) | - | 377576..377902 (+) | 327 | WP_000679756.1 | DUF1433 domain-containing protein | - |
| QAY77_RS01755 (QAY77_01750) | - | 378021..378464 (+) | 444 | WP_000022885.1 | GNAT family N-acetyltransferase | - |
| QAY77_RS01760 (QAY77_01755) | - | 379004..379942 (-) | 939 | WP_001822249.1 | Abi family protein | - |
| QAY77_RS01765 (QAY77_01760) | - | 379981..380682 (-) | 702 | Protein_350 | tyrosine-type recombinase/integrase | - |
| QAY77_RS01770 (QAY77_01765) | selX | 380888..381499 (+) | 612 | WP_000475326.1 | staphylococcal enterotoxin-like toxin X | - |
| QAY77_RS01775 (QAY77_01770) | - | 381868..382236 (+) | 369 | WP_000849177.1 | YxeA family protein | - |
| QAY77_RS01780 (QAY77_01775) | - | 382417..382989 (+) | 573 | WP_000769720.1 | PepSY domain-containing protein | - |
| QAY77_RS01785 (QAY77_01780) | - | 383127..383390 (-) | 264 | WP_001055897.1 | helix-turn-helix domain-containing protein | - |
| QAY77_RS01790 (QAY77_01785) | - | 383690..383941 (+) | 252 | WP_000466748.1 | GlsB/YeaQ/YmgE family stress response membrane protein | - |
Sequence
Protein
Download Length: 167 a.a. Molecular weight: 18539.12 Da Isoelectric Point: 4.7305
>NTDB_id=819769 QAY77_RS01635 WP_000934799.1 362459..362962(+) (ssbA) [Staphylococcus aureus strain BE-MSSA7]
MLNRVVLVGRLTKDPEYRTTPSGVSVATFTLAVNRTFTNAQGEREADFINCVVFRRQADNVNNYLSKGSLAGVDGRLQSR
NYENQEGRRVFVTEVVCDSVQFLEPKNAQQNGGQRQQNEFQDYGQGFGGQQSGQNNSYNNSSNTKQSDNPFANANGPIDI
SDDDLPF
MLNRVVLVGRLTKDPEYRTTPSGVSVATFTLAVNRTFTNAQGEREADFINCVVFRRQADNVNNYLSKGSLAGVDGRLQSR
NYENQEGRRVFVTEVVCDSVQFLEPKNAQQNGGQRQQNEFQDYGQGFGGQQSGQNNSYNNSSNTKQSDNPFANANGPIDI
SDDDLPF
Nucleotide
Download Length: 504 bp
>NTDB_id=819769 QAY77_RS01635 WP_000934799.1 362459..362962(+) (ssbA) [Staphylococcus aureus strain BE-MSSA7]
ATGCTAAATAGAGTTGTATTAGTAGGTCGTTTAACGAAAGATCCGGAATACAGAACCACTCCCTCAGGTGTGAGTGTAGC
GACATTCACTCTTGCAGTAAATCGTACGTTCACGAATGCTCAAGGGGAGCGCGAAGCAGATTTTATTAACTGTGTTGTTT
TTAGAAGACAAGCAGATAATGTAAATAACTATTTATCTAAAGGTAGTTTAGCTGGTGTAGATGGTCGCTTACAATCCCGT
AATTATGAAAATCAAGAAGGTCGTCGTGTGTTTGTTACTGAAGTTGTGTGTGATAGCGTTCAATTCCTTGAACCTAAAAA
TGCGCAACAAAATGGTGGCCAACGTCAACAAAATGAATTCCAAGATTACGGTCAAGGATTCGGTGGTCAACAATCAGGAC
AAAACAATTCGTACAATAATTCATCAAACACGAAACAATCTGATAATCCATTTGCAAATGCAAACGGACCGATTGATATA
AGTGATGATGACTTACCATTCTAA
ATGCTAAATAGAGTTGTATTAGTAGGTCGTTTAACGAAAGATCCGGAATACAGAACCACTCCCTCAGGTGTGAGTGTAGC
GACATTCACTCTTGCAGTAAATCGTACGTTCACGAATGCTCAAGGGGAGCGCGAAGCAGATTTTATTAACTGTGTTGTTT
TTAGAAGACAAGCAGATAATGTAAATAACTATTTATCTAAAGGTAGTTTAGCTGGTGTAGATGGTCGCTTACAATCCCGT
AATTATGAAAATCAAGAAGGTCGTCGTGTGTTTGTTACTGAAGTTGTGTGTGATAGCGTTCAATTCCTTGAACCTAAAAA
TGCGCAACAAAATGGTGGCCAACGTCAACAAAATGAATTCCAAGATTACGGTCAAGGATTCGGTGGTCAACAATCAGGAC
AAAACAATTCGTACAATAATTCATCAAACACGAAACAATCTGATAATCCATTTGCAAATGCAAACGGACCGATTGATATA
AGTGATGATGACTTACCATTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
65.341 |
100 |
0.689 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
54.971 |
100 |
0.563 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
58.491 |
63.473 |
0.371 |
| ssb | Glaesserella parasuis strain SC1401 |
34.463 |
100 |
0.365 |