Detailed information NTG0081879

Bioinformatically predicted

Overview

• Name: comR
• Type: Regulator
• Locus tag: R8619_RS09390
• Genome accession: NZ_AP026918
• Coordinates: 1816833..1817732 (-)
• Length: 299 a.a.
• NCBI ID: WP_000904870.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain PZ900700009
• Function: activate transcription of comX (predicted from homology) Competence regulation

Genomic Context

Location: 1811833..1822732

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R8619_RS09365 (PC0009_18260)	rsmA	1812163..1813035 (-)	873	WP_001216877.1	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	-
R8619_RS09370 (PC0009_18270)	-	1813166..1813474 (-)	309	WP_000333257.1	hypothetical protein	-
R8619_RS09375 (PC0009_18280)	-	1813467..1814108 (-)	642	WP_000565531.1	ABC transporter ATP-binding protein	-
R8619_RS09380 (PC0009_18290)	-	1814110..1816140 (-)	2031	WP_000825278.1	bacteriocin-associated integral membrane family protein	-
R8619_RS09385 (PC0009_18300)	-	1816217..1816513 (-)	297	WP_000815394.1	lactococcin 972 family bacteriocin	-
R8619_RS09390 (PC0009_18310)	comR	1816833..1817732 (-)	900	WP_000904870.1	helix-turn-helix transcriptional regulator	Regulator
R8619_RS09395 (PC0009_18320)	rnmV	1817804..1818364 (-)	561	WP_000660015.1	ribonuclease M5	-
R8619_RS09400 (PC0009_18330)	-	1818364..1819137 (-)	774	WP_000575621.1	TatD family hydrolase	-
R8619_RS09405 (PC0009_18340)	-	1819433..1820161 (-)	729	Protein_1838	DUF1542 domain-containing protein	-
R8619_RS09410 (PC0009_18350)	rpmH	1820370..1820504 (-)	135	WP_000831905.1	50S ribosomal protein L34	-
R8619_RS09415 (PC0009_18360)	-	1820649..1821863 (-)	1215	WP_000666469.1	pyridoxal phosphate-dependent aminotransferase	-
R8619_RS09420 (PC0009_18370)	-	1822019..1822312 (-)	294	WP_000977365.1	hypothetical protein	-

Sequence

Protein

• Length: 299 a.a.
• Molecular weight: 35351.12 Da
• Isoelectric Point: 4.8336

>NTDB_id=81879 R8619_RS09390 WP_000904870.1 1816833..1817732(-) (comR) [Streptococcus pneumoniae strain PZ900700009]
MLIGQKIKEIRIEKGVSRPDFCGDEQELTVRQLSRIESGASQPSLPKLAYIARRLGVPVYSLMPDFSALPPAYLELKYQI
LREPIYGKEEEYDKKEACLEEIYKTYFDNLPKEEQLACEVLQACLDTSRTRRPEYAELILEEHMSQIIEKEVYSTNDMLL
IRLFFYQMLIRKDLAKFINQIEKLMLFLLEQKKVTKLENFFIIRDTLISGMCCLEKVGVTDCFNDYLSCLQEIMDKTQDY
QKKPLVFMFLWKQALREERDFSLAESFYQSSKTFAQLIGDEFLVKKLTEEWQEDVKKYL

Nucleotide

• Length: 900 bp

>NTDB_id=81879 R8619_RS09390 WP_000904870.1 1816833..1817732(-) (comR) [Streptococcus pneumoniae strain PZ900700009]
ATGTTAATTGGTCAAAAAATTAAAGAGATTCGGATAGAAAAAGGAGTTAGTCGTCCAGATTTTTGTGGAGATGAGCAAGA
ACTGACAGTTCGTCAACTGTCGCGAATTGAAAGTGGAGCTTCGCAACCGAGTTTGCCCAAGTTAGCCTATATTGCTCGCC
GGCTAGGAGTTCCAGTTTATAGCCTTATGCCGGATTTTTCAGCTCTTCCTCCTGCTTATTTAGAATTGAAATACCAGATT
TTACGTGAACCAATCTATGGTAAAGAAGAGGAGTACGATAAGAAGGAAGCGTGTTTGGAAGAGATTTATAAAACATACTT
TGATAATCTTCCTAAAGAAGAACAATTAGCATGTGAAGTATTGCAGGCGTGTTTGGATACTTCTAGAACTAGAAGGCCTG
AATATGCAGAGTTAATACTTGAGGAACATATGTCTCAGATCATAGAAAAAGAAGTTTATTCAACAAATGATATGTTGTTG
ATTCGTTTGTTTTTTTATCAAATGCTCATTAGAAAAGATCTTGCCAAATTTATAAATCAAATCGAAAAGCTAATGCTCTT
TCTTTTGGAACAGAAAAAGGTAACTAAATTAGAAAACTTCTTTATAATTAGAGATACTCTTATTTCAGGAATGTGTTGTC
TTGAAAAGGTAGGAGTAACTGATTGTTTTAATGATTATCTATCGTGTTTACAAGAAATTATGGATAAAACTCAAGATTAT
CAAAAGAAACCTCTTGTATTTATGTTTTTGTGGAAGCAAGCATTAAGAGAAGAAAGAGATTTTAGTTTAGCTGAATCATT
TTATCAGTCTTCTAAAACATTTGCGCAGCTAATTGGAGATGAATTTCTAGTAAAGAAATTGACAGAGGAATGGCAAGAGG
ATGTCAAAAAATATTTATAA

Domains

Predicted by InterProScan.

• ComR tetratricopeptide (ComR_TPR) (70-291)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR	Streptococcus mutans UA159	37.755	98.328	0.371
comR	Streptococcus suis P1/7	37.457	97.324	0.365
comR	Streptococcus suis 05ZYH33	37.457	97.324	0.365
comR	Streptococcus pyogenes MGAS8232	36.242	99.666	0.361