Detailed information NTG0081757

Bioinformatically predicted

Overview

• Name: comR
• Type: Regulator
• Locus tag: R8563_RS09440
• Genome accession: NZ_AP026917
• Coordinates: 1820400..1821299 (-)
• Length: 299 a.a.
• NCBI ID: WP_000904834.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain PZ900700007
• Function: activate transcription of comX (predicted from homology) Competence regulation

Genomic Context

Location: 1815400..1826299

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R8563_RS09415 (PC0007_18350)	rsmA	1815637..1816509 (-)	873	WP_001216878.1	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	-
R8563_RS10890 (PC0007_18360)	-	1816895..1817041 (-)	147	WP_000333269.1	hypothetical protein	-
R8563_RS09425 (PC0007_18370)	-	1817034..1817675 (-)	642	WP_000565531.1	ABC transporter ATP-binding protein	-
R8563_RS09430 (PC0007_18380)	-	1817677..1819707 (-)	2031	WP_000825268.1	bacteriocin-associated integral membrane family protein	-
R8563_RS09435 (PC0007_18390)	-	1819784..1820080 (-)	297	WP_000815394.1	lactococcin 972 family bacteriocin	-
R8563_RS09440 (PC0007_18400)	comR	1820400..1821299 (-)	900	WP_000904834.1	helix-turn-helix transcriptional regulator	Regulator
R8563_RS09445 (PC0007_18410)	rnmV	1821371..1821931 (-)	561	WP_000664448.1	ribonuclease M5	-
R8563_RS09450 (PC0007_18420)	-	1821931..1822704 (-)	774	WP_000575594.1	TatD family hydrolase	-
R8563_RS09455 (PC0007_18430)	-	1823009..1823980 (-)	972	Protein_1848	DUF1542 domain-containing protein	-
R8563_RS09460 (PC0007_18440)	rpmH	1824186..1824320 (-)	135	WP_000831905.1	50S ribosomal protein L34	-
R8563_RS09465 (PC0007_18450)	-	1824465..1825679 (-)	1215	WP_000666469.1	pyridoxal phosphate-dependent aminotransferase	-
R8563_RS09470	-	1825835..1826128 (-)	294	WP_000977374.1	hypothetical protein	-

Sequence

Protein

• Length: 299 a.a.
• Molecular weight: 35263.10 Da
• Isoelectric Point: 4.9762

>NTDB_id=81757 R8563_RS09440 WP_000904834.1 1820400..1821299(-) (comR) [Streptococcus pneumoniae strain PZ900700007]
MLIGQKIKEIRIEKGISRPDFCGDEQELTVRQLSRIESGASQPSLPKLAYIARRLGVPVYSLMPDFSALPSAYLELKYQI
LREPIYGKEEEYDKKEACLEEIYKTYFDNLPKEEQLACEVLQACLDTSRTRRPEYAELILEEHMPQIIEKEAYSINDMLL
IRLFFYQMLIRKDLAKFINQIEKLMLFLLEQKKVTQIENYFIIRDTLISGMCCLEKVGVTDCFNDYLSCLQEIMDKTQDY
QKKPLVFMFLWKQALRVERDFSLAESFYQSSKTFAKLIGDGFLVKKLTEEWQEDVKKYL

Nucleotide

• Length: 900 bp

>NTDB_id=81757 R8563_RS09440 WP_000904834.1 1820400..1821299(-) (comR) [Streptococcus pneumoniae strain PZ900700007]
ATGTTAATTGGTCAAAAAATTAAAGAGATTCGGATAGAAAAAGGAATTAGTCGTCCAGATTTTTGTGGAGATGAGCAAGA
ACTGACAGTTCGTCAACTGTCGCGAATTGAAAGTGGAGCTTCGCAACCGAGTTTGCCCAAGTTAGCCTATATTGCTCGCC
GGCTAGGAGTTCCAGTTTATAGCCTTATGCCGGATTTTTCAGCTCTTCCTTCTGCTTATTTAGAATTGAAATACCAGATT
TTACGTGAACCAATCTATGGTAAAGAAGAGGAGTACGATAAGAAGGAAGCGTGTTTGGAAGAGATTTATAAAACATACTT
TGATAATCTTCCTAAAGAAGAACAATTAGCATGTGAAGTATTGCAGGCGTGTTTGGATACTTCTAGAACTAGAAGGCCTG
AATATGCAGAGTTAATACTTGAGGAACATATGCCTCAGATTATAGAAAAAGAAGCTTATTCAATAAATGATATGTTGTTG
ATTCGTTTGTTTTTTTATCAAATGCTCATTAGAAAAGATCTTGCCAAATTTATAAATCAAATCGAAAAGCTAATGCTCTT
TCTTTTGGAACAGAAGAAGGTAACTCAAATAGAGAATTACTTTATAATTAGAGATACTCTTATTTCAGGAATGTGTTGTC
TTGAAAAGGTAGGAGTAACTGATTGTTTTAATGATTATCTATCGTGTTTACAAGAAATTATGGATAAAACTCAAGATTAT
CAAAAGAAACCTCTTGTATTTATGTTTTTGTGGAAGCAAGCATTAAGAGTAGAAAGAGATTTTAGTTTAGCTGAATCATT
TTATCAGTCTTCTAAAACATTTGCGAAGCTAATTGGAGATGGATTTCTAGTAAAGAAATTGACAGAGGAATGGCAAGAGG
ATGTCAAAAAATATTTATAA

Domains

Predicted by InterProScan.

• ComR tetratricopeptide (ComR_TPR) (70-291)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR	Streptococcus mutans UA159	37.755	98.328	0.371
comR	Streptococcus suis P1/7	38.144	97.324	0.371
comR	Streptococcus suis 05ZYH33	38.144	97.324	0.371
comR	Streptococcus suis D9	36.12	100	0.361