Detailed information NTG0817468

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: QAP03_RS02395
• Genome accession: NZ_CP122955
• Coordinates: 500406..501206 (+)
• Length: 266 a.a.
• NCBI ID: WP_286490976.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain BS27-2
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 495406..506206

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QAP03_RS02360 (QAP03_02355)	pseH	495899..496441 (+)	543	WP_286490981.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-
QAP03_RS02365 (QAP03_02360)	-	496374..497312 (-)	939	WP_286490980.1	tetraacyldisaccharide 4'-kinase	-
QAP03_RS02370 (QAP03_02365)	-	497309..498091 (-)	783	WP_286490979.1	NAD+ synthase	-
QAP03_RS02380 (QAP03_02375)	ilvC	498340..499332 (+)	993	WP_286490978.1	ketol-acid reductoisomerase	-
QAP03_RS02385 (QAP03_02380)	minD	499356..500162 (+)	807	WP_286490977.1	septum site-determining protein MinD	-
QAP03_RS02390 (QAP03_02385)	minE	500159..500392 (+)	234	WP_000051414.1	cell division topological specificity factor MinE	-
QAP03_RS02395 (QAP03_02390)	dprA	500406..501206 (+)	801	WP_286490976.1	DNA-processing protein DprA	Machinery gene
QAP03_RS02400 (QAP03_02395)	dprB	501203..501607 (+)	405	WP_286490975.1	Holliday junction resolvase RuvX	Machinery gene
QAP03_RS02405 (QAP03_02400)	-	501891..502250 (+)	360	WP_286490974.1	tetratricopeptide repeat protein	-
QAP03_RS02410 (QAP03_02405)	-	502436..502774 (+)	339	WP_286490973.1	hypothetical protein	-
QAP03_RS02415 (QAP03_02410)	-	502758..503318 (+)	561	WP_286490972.1	hypothetical protein	-
QAP03_RS02420 (QAP03_02415)	-	503406..504287 (-)	882	WP_286490971.1	RluA family pseudouridine synthase	-
QAP03_RS02425 (QAP03_02420)	recJ	504287..505837 (-)	1551	WP_286490970.1	single-stranded-DNA-specific exonuclease RecJ	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29824.75 Da
• Isoelectric Point: 7.7768

>NTDB_id=817468 QAP03_RS02395 WP_286490976.1 500406..501206(+) (dprA) [Helicobacter pylori strain BS27-2]
MKSNFPYSALEDIPKAFDILKDPPKKLYCVGDIKLLEAPLKVAIIGTRRPTPYSKQHTITLARELAKNGAVIVSGGALGV
DIIAQENALPKTIMLSPCSLDFIYPTNNHKVIQEIAQNGLILSEYEKDFMPIKGSFLARNRLVIALSDAVIIPQADLQSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDYHLKEMPEMKDEFLEYCAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHIVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=817468 QAP03_RS02395 WP_286490976.1 500406..501206(+) (dprA) [Helicobacter pylori strain BS27-2]
ATGAAAAGCAACTTCCCATACAGCGCACTAGAGGATATCCCTAAAGCCTTTGATATTCTCAAAGACCCCCCTAAAAAGCT
CTATTGTGTGGGCGATATAAAGCTTTTAGAAGCGCCTTTAAAAGTGGCTATCATCGGCACAAGAAGACCCACCCCTTACA
GCAAGCAACACACCATCACTCTAGCCAGAGAGCTTGCTAAAAATGGCGCGGTTATTGTGAGCGGAGGAGCGTTAGGCGTG
GATATTATCGCTCAAGAAAACGCCTTACCAAAAACGATCATGCTTTCGCCTTGCAGTTTGGATTTTATCTATCCTACGAA
CAATCATAAAGTGATCCAAGAAATCGCGCAAAACGGCTTGATTTTAAGCGAATATGAAAAGGATTTTATGCCCATTAAAG
GCTCTTTTTTAGCGAGAAACCGCTTGGTGATCGCTTTAAGCGATGCGGTCATTATCCCCCAAGCGGATTTACAAAGCGGC
TCTATGAGTAGCGCGAGATTAGCTCAAAAATACCAAAAACCCTTGTTTGTTTTACCCCAGCGCCTGAATGAGAGCGATGG
CACTAATGAGCTTTTAGAAAAAGGGCAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAACACCCTTTTAAAAGACT
ACCATTTAAAAGAAATGCCTGAAATGAAAGATGAATTTTTAGAATATTGCGCCAAAAACCCAAGCTATGAAGAGGCGTAT
CTCAAATTTGGGGATAAGCTTTTAGAATACGAGCTGTTGGGTAAGATCAAGCGCATCAATCATATCGTGGTGTTAGCGTG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (11-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	96.241	100	0.962
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	48.23	84.962	0.41