Detailed information NTG0817424

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: PH204_RS05170
• Genome accession: NZ_CP122953
• Coordinates: 1097808..1098608 (-)
• Length: 266 a.a.
• NCBI ID: WP_286446664.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain BS30
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1092808..1103608

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PH204_RS05140 (PH204_05140)	recJ	1092871..1094421 (+)	1551	WP_286446656.1	single-stranded-DNA-specific exonuclease RecJ	-
PH204_RS05145 (PH204_05145)	-	1094421..1095302 (+)	882	WP_286446657.1	RluA family pseudouridine synthase	-
PH204_RS05150 (PH204_05150)	-	1095385..1095951 (-)	567	WP_286446658.1	hypothetical protein	-
PH204_RS05155 (PH204_05155)	-	1095935..1096240 (-)	306	WP_100979727.1	hypothetical protein	-
PH204_RS07765	-	1096427..1096897 (-)	471	WP_350310572.1	tetratricopeptide repeat protein	-
PH204_RS07770	-	1096860..1097006 (-)	147	WP_350310573.1	SEL1-like repeat protein	-
PH204_RS07775	-	1096969..1097274 (-)	306	WP_350310574.1	hypothetical protein	-
PH204_RS05165 (PH204_05165)	dprB	1097407..1097811 (-)	405	WP_286446662.1	Holliday junction resolvase RuvX	Machinery gene
PH204_RS05170 (PH204_05170)	dprA	1097808..1098608 (-)	801	WP_286446664.1	DNA-processing protein DprA	Machinery gene
PH204_RS05175 (PH204_05175)	minE	1098615..1098848 (-)	234	WP_053575872.1	cell division topological specificity factor MinE	-
PH204_RS05180 (PH204_05180)	minD	1098845..1099651 (-)	807	WP_286446667.1	septum site-determining protein MinD	-
PH204_RS05185 (PH204_05185)	ilvC	1099675..1100667 (-)	993	WP_286446669.1	ketol-acid reductoisomerase	-
PH204_RS05195 (PH204_05195)	-	1100916..1101698 (+)	783	WP_286446671.1	NAD+ synthase	-
PH204_RS05200 (PH204_05200)	-	1101695..1102633 (+)	939	WP_286446672.1	tetraacyldisaccharide 4'-kinase	-
PH204_RS05205 (PH204_05205)	pseH	1102566..1103108 (-)	543	WP_286446674.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29954.95 Da
• Isoelectric Point: 9.1549

>NTDB_id=817424 PH204_RS05170 WP_286446664.1 1097808..1098608(-) (dprA) [Helicobacter pylori strain BS30]
MKSNFQYSTLENIPKVFNILKDPPKKLYCVGDTKLLEAPLKVAIIGTRRPTPYSKQHTITLARELAKNGAVIVSGGALGV
DIIAQENALPKTIMLSPCSLDLIYPTNNHKVIQEIAQNGLILSEYEKDFMPVKGSFLARNRLVIALSDAVIIPQADLKSG
SMSSTRLAQKYQKPLFVLPQRLNESDGTNELLEKRQAQGIFNIQNFINTLLKDHHLKEMPEMKDEFLEYCAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHLVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=817424 PH204_RS05170 WP_286446664.1 1097808..1098608(-) (dprA) [Helicobacter pylori strain BS30]
ATGAAAAGTAATTTCCAATACAGCACGCTAGAAAATATCCCTAAAGTCTTTAACATTCTCAAAGACCCCCCTAAAAAGCT
CTATTGTGTGGGCGATACCAAGCTTTTAGAAGCGCCTTTAAAAGTGGCTATCATAGGCACAAGAAGACCCACCCCTTACA
GCAAGCAACACACGATCACTCTAGCCAGAGAGCTTGCTAAAAATGGCGCGGTTATTGTGAGCGGGGGAGCGTTGGGCGTG
GATATTATCGCTCAAGAAAACGCCTTGCCAAAAACGATCATGCTTTCGCCTTGCAGTTTGGATTTGATCTATCCTACGAA
TAACCATAAAGTGATCCAAGAAATCGCACAAAACGGCTTGATTTTAAGCGAATATGAAAAGGATTTCATGCCCGTTAAAG
GCTCTTTTTTAGCGAGAAACCGCCTAGTGATCGCTTTAAGCGATGCGGTCATTATCCCCCAAGCGGATTTAAAAAGCGGC
TCCATGAGCAGCACAAGATTAGCCCAGAAATACCAAAAGCCTTTATTTGTTTTACCCCAACGCTTGAATGAGAGCGATGG
CACTAATGAGCTTTTAGAAAAAAGGCAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAACACCCTTTTAAAAGACC
ACCATTTAAAAGAAATGCCTGAAATGAAAGATGAATTTTTAGAATATTGCGCTAAAAACCCGAGCTATGAAGAGGCGTAT
CTCAAATTTGGGGATAAGCTTTTAGAATACGAGCTGTTGGGTAAGATCAAGCGCATCAATCATCTCGTGGTGTTAGCGTG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (12-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	95.113	100	0.951
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	48.23	84.962	0.41