Detailed information NTG0817401

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: QAP05_RS05530
• Genome accession: NZ_CP122952
• Coordinates: 1151480..1152280 (-)
• Length: 266 a.a.
• NCBI ID: WP_286490976.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain BS27-1
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1146480..1157280

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QAP05_RS05500 (QAP05_05500)	recJ	1146849..1148399 (+)	1551	WP_286490970.1	single-stranded-DNA-specific exonuclease RecJ	-
QAP05_RS05505 (QAP05_05505)	-	1148399..1149280 (+)	882	WP_286490971.1	RluA family pseudouridine synthase	-
QAP05_RS05510 (QAP05_05510)	-	1149368..1149928 (-)	561	WP_286490972.1	hypothetical protein	-
QAP05_RS05515 (QAP05_05515)	-	1149912..1150250 (-)	339	WP_286490973.1	hypothetical protein	-
QAP05_RS05520 (QAP05_05520)	-	1150436..1150795 (-)	360	WP_286490974.1	tetratricopeptide repeat protein	-
QAP05_RS05525 (QAP05_05525)	dprB	1151079..1151483 (-)	405	WP_286490975.1	Holliday junction resolvase RuvX	Machinery gene
QAP05_RS05530 (QAP05_05530)	dprA	1151480..1152280 (-)	801	WP_286490976.1	DNA-processing protein DprA	Machinery gene
QAP05_RS05535 (QAP05_05535)	minE	1152294..1152527 (-)	234	WP_000051414.1	cell division topological specificity factor MinE	-
QAP05_RS05540 (QAP05_05540)	minD	1152524..1153330 (-)	807	WP_286490977.1	septum site-determining protein MinD	-
QAP05_RS05545 (QAP05_05545)	ilvC	1153354..1154346 (-)	993	WP_286490978.1	ketol-acid reductoisomerase	-
QAP05_RS05555 (QAP05_05555)	-	1154595..1155377 (+)	783	WP_286490979.1	NAD+ synthase	-
QAP05_RS05560 (QAP05_05560)	-	1155374..1156312 (+)	939	WP_286490980.1	tetraacyldisaccharide 4'-kinase	-
QAP05_RS05565 (QAP05_05565)	pseH	1156245..1156787 (-)	543	WP_286490981.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29824.75 Da
• Isoelectric Point: 7.7768

>NTDB_id=817401 QAP05_RS05530 WP_286490976.1 1151480..1152280(-) (dprA) [Helicobacter pylori strain BS27-1]
MKSNFPYSALEDIPKAFDILKDPPKKLYCVGDIKLLEAPLKVAIIGTRRPTPYSKQHTITLARELAKNGAVIVSGGALGV
DIIAQENALPKTIMLSPCSLDFIYPTNNHKVIQEIAQNGLILSEYEKDFMPIKGSFLARNRLVIALSDAVIIPQADLQSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDYHLKEMPEMKDEFLEYCAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHIVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=817401 QAP05_RS05530 WP_286490976.1 1151480..1152280(-) (dprA) [Helicobacter pylori strain BS27-1]
ATGAAAAGCAACTTCCCATACAGCGCACTAGAGGATATCCCTAAAGCCTTTGATATTCTCAAAGACCCCCCTAAAAAGCT
CTATTGTGTGGGCGATATAAAGCTTTTAGAAGCGCCTTTAAAAGTGGCTATCATCGGCACAAGAAGACCCACCCCTTACA
GCAAGCAACACACCATCACTCTAGCCAGAGAGCTTGCTAAAAATGGCGCGGTTATTGTGAGCGGAGGAGCGTTAGGCGTG
GATATTATCGCTCAAGAAAACGCCTTACCAAAAACGATCATGCTTTCGCCTTGCAGTTTGGATTTTATCTATCCTACGAA
CAATCATAAAGTGATCCAAGAAATCGCGCAAAACGGCTTGATTTTAAGCGAATATGAAAAGGATTTTATGCCCATTAAAG
GCTCTTTTTTAGCGAGAAACCGCTTGGTGATCGCTTTAAGCGATGCGGTCATTATCCCCCAAGCGGATTTACAAAGCGGC
TCTATGAGTAGCGCGAGATTAGCTCAAAAATACCAAAAACCCTTGTTTGTTTTACCCCAGCGCCTGAATGAGAGCGATGG
CACTAATGAGCTTTTAGAAAAAGGGCAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAACACCCTTTTAAAAGACT
ACCATTTAAAAGAAATGCCTGAAATGAAAGATGAATTTTTAGAATATTGCGCCAAAAACCCAAGCTATGAAGAGGCGTAT
CTCAAATTTGGGGATAAGCTTTTAGAATACGAGCTGTTGGGTAAGATCAAGCGCATCAATCATATCGTGGTGTTAGCGTG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (11-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	96.241	100	0.962
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	48.23	84.962	0.41