Detailed information NTG0817360

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: QAP01_RS05685
• Genome accession: NZ_CP122950
• Coordinates: 1194282..1195082 (-)
• Length: 266 a.a.
• NCBI ID: WP_140512197.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain BS28-1
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1189282..1200082

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QAP01_RS05645 (QAP01_05645)	-	1189643..1190428 (-)	786	WP_140573603.1	hypothetical protein	-
QAP01_RS05650 (QAP01_05650)	-	1190428..1190809 (-)	382	Protein_1099	DUF1294 domain-containing protein	-
QAP01_RS05655 (QAP01_05655)	-	1191103..1191528 (-)	426	WP_237016740.1	hypothetical protein	-
QAP01_RS05660 (QAP01_05660)	-	1191632..1191763 (-)	132	WP_286497977.1	lysozyme	-
QAP01_RS05665 (QAP01_05665)	-	1191793..1192359 (-)	567	WP_140521902.1	hypothetical protein	-
QAP01_RS05670 (QAP01_05670)	-	1192343..1192648 (-)	306	WP_100975247.1	hypothetical protein	-
QAP01_RS05675 (QAP01_05675)	-	1192776..1193651 (-)	876	WP_286497978.1	tetratricopeptide repeat protein	-
QAP01_RS05680 (QAP01_05680)	dprB	1193881..1194285 (-)	405	WP_286497979.1	Holliday junction resolvase RuvX	Machinery gene
QAP01_RS05685 (QAP01_05685)	dprA	1194282..1195082 (-)	801	WP_140512197.1	DNA-processing protein DprA	Machinery gene
QAP01_RS05690 (QAP01_05690)	minE	1195089..1195322 (-)	234	WP_108349316.1	cell division topological specificity factor MinE	-
QAP01_RS05695 (QAP01_05695)	minD	1195319..1196125 (-)	807	WP_286497980.1	septum site-determining protein MinD	-
QAP01_RS05700 (QAP01_05700)	ilvC	1196149..1197141 (-)	993	WP_286497981.1	ketol-acid reductoisomerase	-
QAP01_RS05710 (QAP01_05710)	-	1197390..1198172 (+)	783	WP_286497982.1	NAD+ synthase	-
QAP01_RS05715 (QAP01_05715)	-	1198169..1199107 (+)	939	WP_286497983.1	tetraacyldisaccharide 4'-kinase	-
QAP01_RS05720 (QAP01_05720)	pseH	1199040..1199582 (-)	543	WP_286497984.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29842.73 Da
• Isoelectric Point: 8.2191

>NTDB_id=817360 QAP01_RS05685 WP_140512197.1 1194282..1195082(-) (dprA) [Helicobacter pylori strain BS28-1]
MKSNFQYSALENIPKAFDILKDPPKKLYCVGDTKLLEAPLKVAIIGTRRPTPYSKQHTITLARELAKNGAVIVSGGALGV
DIIAQENALPKTIMLSPCSLDFIYPTNNHKVIQEIAQNGLILSEYEKDFMPIKGSFLARNRLVIALSDAVIIPQADLQSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDYHLKEMPEMKDEFLEYCAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHIVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=817360 QAP01_RS05685 WP_140512197.1 1194282..1195082(-) (dprA) [Helicobacter pylori strain BS28-1]
ATGAAAAGTAATTTCCAATACAGCGCGCTAGAGAATATCCCTAAAGCCTTTGACATTCTCAAAGACCCCCCTAAAAAGCT
CTATTGTGTGGGCGATACCAAGCTTTTAGAAGCGCCTTTAAAAGTGGCTATCATCGGCACAAGAAGACCCACCCCTTACA
GCAAGCAACACACCATCACTCTAGCCAGAGAGCTTGCTAAAAATGGCGCGGTTATTGTGAGCGGAGGAGCGTTAGGCGTG
GATATTATCGCTCAAGAAAACGCCTTACCAAAAACGATCATGCTTTCGCCTTGCAGTTTGGATTTTATCTATCCTACGAA
CAATCATAAAGTGATCCAAGAAATCGCGCAAAACGGCTTGATTTTAAGCGAATATGAAAAGGATTTTATGCCCATTAAAG
GCTCTTTTTTAGCCAGAAACCGCCTGGTGATCGCTTTAAGCGATGCGGTCATTATCCCCCAAGCGGATTTACAAAGCGGC
TCTATGAGTAGTGCGAGATTAGCTCAAAAATACCAAAAACCCTTGTTTGTTTTACCCCAGCGCCTGAATGAGAGCGATGG
CACTAATGAGCTTTTAGAAAAAGGGCAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAACACCCTTTTAAAAGACT
ACCATTTAAAAGAAATGCCTGAAATGAAAGATGAATTTTTAGAATATTGCGCCAAAAACCCAAGCTATGAAGAGGCGTAT
CTCAAATTTGGGGATAAGCTTTTAGAATACGAGCTGTTGGGTAAGATCAAGCGCATCAATCATATCGTGGTGTTAGCGTG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (12-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	97.368	100	0.974
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	48.23	84.962	0.41