Detailed information NTG0817319

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: QAP02_RS05655
• Genome accession: NZ_CP122948
• Coordinates: 1179751..1180551 (-)
• Length: 266 a.a.
• NCBI ID: WP_286463406.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain BS21
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1174751..1185551

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QAP02_RS05625 (QAP02_05625)	recJ	1175169..1176719 (+)	1551	WP_286463400.1	single-stranded-DNA-specific exonuclease RecJ	-
QAP02_RS05630 (QAP02_05630)	-	1176719..1177600 (+)	882	WP_286463401.1	RluA family pseudouridine synthase	-
QAP02_RS05635 (QAP02_05635)	-	1177692..1178252 (-)	561	WP_120927091.1	hypothetical protein	-
QAP02_RS05640 (QAP02_05640)	-	1178236..1178574 (-)	339	WP_000699885.1	hypothetical protein	-
QAP02_RS05645 (QAP02_05645)	-	1178760..1179119 (-)	360	WP_286464805.1	tetratricopeptide repeat protein	-
QAP02_RS05650 (QAP02_05650)	dprB	1179350..1179754 (-)	405	WP_286463405.1	Holliday junction resolvase RuvX	Machinery gene
QAP02_RS05655 (QAP02_05655)	dprA	1179751..1180551 (-)	801	WP_286463406.1	DNA-processing protein DprA	Machinery gene
QAP02_RS05660 (QAP02_05660)	minE	1180565..1180798 (-)	234	WP_000051425.1	cell division topological specificity factor MinE	-
QAP02_RS05665 (QAP02_05665)	minD	1180795..1181601 (-)	807	WP_286463408.1	septum site-determining protein MinD	-
QAP02_RS05670 (QAP02_05670)	ilvC	1181625..1182617 (-)	993	WP_286463409.1	ketol-acid reductoisomerase	-
QAP02_RS05680 (QAP02_05680)	-	1182866..1183648 (+)	783	WP_140479774.1	NAD+ synthase	-
QAP02_RS05685 (QAP02_05685)	-	1183645..1184583 (+)	939	WP_286463411.1	tetraacyldisaccharide 4'-kinase	-
QAP02_RS05690 (QAP02_05690)	pseH	1184516..1185058 (-)	543	WP_140615414.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29872.93 Da
• Isoelectric Point: 9.1110

>NTDB_id=817319 QAP02_RS05655 WP_286463406.1 1179751..1180551(-) (dprA) [Helicobacter pylori strain BS21]
MKSNFPYSTLENIPKAFDILKDPPKKLYCVGDIKLLRAPLKVAIIGTRRPTPYSKQHTITLARELAKNGAVIVSGGALGV
DIIAQENALPKTIMLSPCSLDLIYPTNNYKVIQEIAQNGLILSEYEKDFMPIKGSFLARNRLVIALSDAVIIPQADLKSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDYHLKEMPEMKDEFLEYCAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHIVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=817319 QAP02_RS05655 WP_286463406.1 1179751..1180551(-) (dprA) [Helicobacter pylori strain BS21]
ATGAAAAGCAATTTCCCATACAGCACGCTAGAAAATATCCCTAAAGCCTTTGACATTCTCAAAGACCCCCCTAAAAAGCT
CTATTGTGTGGGCGATATAAAGCTTTTGAGAGCACCTTTAAAAGTGGCTATCATCGGCACAAGAAGACCCACCCCTTATA
GCAAGCAGCACACCATCACCCTAGCCAGAGAGCTTGCTAAAAATGGTGCGGTTATTGTGAGCGGAGGAGCGTTAGGCGTG
GATATCATCGCTCAAGAAAACGCCTTGCCAAAAACCATCATGCTTTCGCCTTGCAGTTTGGATTTGATCTATCCTACGAA
CAATTATAAAGTGATCCAAGAAATCGCGCAAAACGGCTTGATTTTAAGCGAATATGAAAAGGATTTTATGCCTATTAAAG
GCTCTTTTTTAGCCAGAAACCGCCTGGTGATCGCTTTAAGCGATGCGGTGATTATCCCCCAAGCGGATTTAAAAAGCGGC
TCTATGAGCAGCGCGAGATTAGCTCAAAAATACCAAAAACCCTTATTTGTTTTACCCCAGCGCTTGAATGAGAGCGATGG
CACTAATGAGCTTTTAGAAAAAGGGCAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAACACCCTTTTAAAAGACT
ACCATTTAAAAGAAATGCCTGAAATGAAAGATGAATTTTTAGAATATTGCGCGAAAAACCCTAGCTATGAAGAAGCGTAT
CTCAAATTTGGGGATAAGCTTTTAGAATACGAGCTGTTGGGTAAGATCAAGCGCATCAATCATATCGTGGTGTTAGCGTG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (12-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	96.617	100	0.966
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	48.673	84.962	0.414