Detailed information NTG0817275

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: QAP07_RS02450
• Genome accession: NZ_CP122946
• Coordinates: 512599..513399 (+)
• Length: 266 a.a.
• NCBI ID: WP_286444912.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain BS31
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 507599..518399

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QAP07_RS02415 (QAP07_02415)	pseH	508104..508646 (+)	543	WP_286444907.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-
QAP07_RS02420 (QAP07_02420)	-	508579..509517 (-)	939	WP_286444908.1	tetraacyldisaccharide 4'-kinase	-
QAP07_RS02425 (QAP07_02425)	-	509514..510296 (-)	783	WP_286444909.1	NAD+ synthase	-
QAP07_RS02435 (QAP07_02435)	ilvC	510483..511547 (+)	1065	WP_286444910.1	ketol-acid reductoisomerase	-
QAP07_RS02440 (QAP07_02440)	minD	511556..512362 (+)	807	WP_286444911.1	septum site-determining protein MinD	-
QAP07_RS02445 (QAP07_02445)	minE	512359..512592 (+)	234	WP_000051425.1	cell division topological specificity factor MinE	-
QAP07_RS02450 (QAP07_02450)	dprA	512599..513399 (+)	801	WP_286444912.1	DNA-processing protein DprA	Machinery gene
QAP07_RS02455 (QAP07_02455)	dprB	513396..513800 (+)	405	WP_286444913.1	Holliday junction resolvase RuvX	Machinery gene
QAP07_RS02460 (QAP07_02460)	-	514082..514549 (+)	468	WP_286444915.1	tetratricopeptide repeat protein	-
QAP07_RS02465 (QAP07_02465)	-	514735..515073 (+)	339	WP_000699885.1	hypothetical protein	-
QAP07_RS02470 (QAP07_02470)	-	515057..515617 (+)	561	WP_286444916.1	hypothetical protein	-
QAP07_RS02475 (QAP07_02475)	-	515729..516610 (-)	882	WP_286444917.1	RluA family pseudouridine synthase	-
QAP07_RS02480 (QAP07_02480)	recJ	516610..518160 (-)	1551	WP_286444918.1	single-stranded-DNA-specific exonuclease RecJ	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 30000.92 Da
• Isoelectric Point: 9.3092

>NTDB_id=817275 QAP07_RS02450 WP_286444912.1 512599..513399(+) (dprA) [Helicobacter pylori strain BS31]
MKSNFQYSALENIPKAFDRLKDPPKKLYCVGDTKLLRAPLKVAIIGTRRPTPYSKQHTITLARELAKNGTVIVSGGALGV
DIIAQENALPKTIMLSPCSLDFIYPTNNHKVIQEIAQNGLILSEYEKDFMPVKGSFLARNRLVIALSDVVIIPQADLQSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDYHLKEMPEMKDEFLEYFAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHLVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=817275 QAP07_RS02450 WP_286444912.1 512599..513399(+) (dprA) [Helicobacter pylori strain BS31]
ATGAAAAGTAATTTCCAATACAGCGCGCTAGAAAATATCCCTAAAGCCTTTGATAGGCTCAAAGACCCCCCTAAAAAGCT
CTATTGTGTGGGCGATACAAAGCTTTTGAGAGCACCTTTAAAAGTGGCTATCATCGGCACAAGAAGACCCACCCCTTACA
GCAAGCAACACACGATCACTCTAGCCAGAGAGCTTGCTAAAAATGGCACGGTTATTGTGAGTGGGGGAGCGTTAGGCGTG
GATATTATCGCTCAAGAAAACGCCTTACCAAAAACGATCATGCTTTCGCCTTGCAGTCTGGATTTCATCTATCCTACGAA
CAACCATAAAGTGATCCAAGAAATCGCGCAAAACGGCTTGATTTTAAGCGAATATGAAAAGGATTTCATGCCCGTTAAAG
GCTCTTTTTTAGCCAGAAACCGCCTGGTGATCGCTTTAAGCGATGTAGTGATTATCCCCCAAGCGGATTTACAAAGCGGC
TCTATGAGCAGTGCGAGATTAGCCCAAAAATACCAAAAACCCTTGTTTGTTTTACCCCAGCGCTTGAATGAGAGCGATGG
CACTAATGAGCTTTTAGAAAAAGGGCAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAACACCCTTTTAAAAGATT
ATCATTTAAAAGAAATGCCTGAAATGAAAGATGAATTTTTAGAATATTTTGCGAAAAACCCTAGCTATGAAGAGGCGTAT
CTCAAATTTGGGGATAAGCTTTTAGAATACGAGCTGTTGGGTAAGATCAAGCGCATCAATCATCTCGTGGTGTTAGCATG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (11-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	95.865	100	0.959
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	47.345	84.962	0.402