Detailed information NTG0816232

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: QCM05_RS00655
• Genome accession: NZ_CP122515
• Coordinates: 136248..137048 (-)
• Length: 266 a.a.
• NCBI ID: WP_140445954.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain HP22
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 131248..142048

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QCM05_RS00625 (QCM05_00625)	-	132365..133438 (+)	1074	WP_279963062.1	tyrosine-type recombinase/integrase	-
QCM05_RS00630 (QCM05_00630)	-	133520..134204 (-)	685	Protein_124	CAAX protease	-
QCM05_RS07650	-	134245..134369 (-)	125	Protein_125	lysozyme	-
QCM05_RS00635 (QCM05_00635)	-	134380..134946 (-)	567	WP_140596169.1	hypothetical protein	-
QCM05_RS00640 (QCM05_00640)	-	134930..135268 (-)	339	WP_000699916.1	hypothetical protein	-
QCM05_RS00645 (QCM05_00645)	-	135458..135680 (-)	223	Protein_128	tetratricopeptide repeat protein	-
QCM05_RS00650 (QCM05_00650)	dprB	135847..136251 (-)	405	WP_140445955.1	Holliday junction resolvase RuvX	Machinery gene
QCM05_RS00655 (QCM05_00655)	dprA	136248..137048 (-)	801	WP_140445954.1	DNA-processing protein DprA	Machinery gene
QCM05_RS00660 (QCM05_00660)	minE	137060..137293 (-)	234	WP_120818870.1	cell division topological specificity factor MinE	-
QCM05_RS00665 (QCM05_00665)	minD	137290..138096 (-)	807	WP_001019101.1	septum site-determining protein MinD	-
QCM05_RS00670 (QCM05_00670)	ilvC	138121..139113 (-)	993	WP_279963064.1	ketol-acid reductoisomerase	-
QCM05_RS00680 (QCM05_00680)	-	139371..140153 (+)	783	WP_279963065.1	NAD+ synthase	-
QCM05_RS00685 (QCM05_00685)	-	140150..141088 (+)	939	WP_279963066.1	tetraacyldisaccharide 4'-kinase	-
QCM05_RS00690 (QCM05_00690)	pseH	141021..141563 (-)	543	WP_279963067.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29766.66 Da
• Isoelectric Point: 8.5799

>NTDB_id=816232 QCM05_RS00655 WP_140445954.1 136248..137048(-) (dprA) [Helicobacter pylori strain HP22]
MKSNFQYSALENIPKAFDILKDPPKKLYCAGDIKLLDAPLKVAIIGTRRPTPYSKQHTITLARELAKNGAVIVSGGALGV
DIIAQENALPKTIMLSPCSLDFVYPTNNHKVIQEIAQNGLILSEYEKDFMPVKGSFLARNRLVIALSDAVIIPQADLKSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDYHLKEMPEIKDEFLEYCAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHLVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=816232 QCM05_RS00655 WP_140445954.1 136248..137048(-) (dprA) [Helicobacter pylori strain HP22]
ATGAAAAGCAACTTCCAATACAGCGCGCTAGAGAATATCCCTAAAGCCTTTGACATTCTCAAAGACCCCCCTAAAAAGCT
CTATTGTGCGGGCGATATAAAGCTTTTAGATGCGCCTTTAAAAGTGGCTATCATCGGTACAAGAAGACCCACCCCTTATA
GCAAGCAACACACCATCACTCTAGCCAGAGAGCTTGCTAAAAATGGCGCGGTTATTGTGAGCGGAGGAGCGTTAGGCGTG
GATATTATCGCTCAAGAAAACGCCTTACCAAAAACGATCATGCTTTCGCCTTGCAGTTTGGATTTTGTCTATCCTACGAA
CAACCATAAAGTGATCCAAGAAATCGCGCAAAACGGCTTGATTTTAAGCGAATATGAAAAGGATTTTATGCCCGTTAAAG
GCTCTTTTTTAGCGAGAAACCGCCTGGTGATCGCTTTAAGCGATGCGGTCATTATCCCCCAAGCGGATTTAAAAAGCGGC
TCTATGAGCAGCGCTAGATTAGCCCAAAAGTATCAAAAACCCTTATTTGTTTTGCCTCAGCGCCTGAATGAGAGCGATGG
CACTAATGAGCTTTTAGAAAAAGGGCAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAACACCCTTTTAAAAGACT
ACCATTTAAAAGAAATGCCTGAAATCAAAGATGAATTTTTAGAATATTGCGCCAAAAACCCTAGCTATGAAGAAGCGTAT
CTCAAATTTGGGGACAAGCTTTTAGAATACGAGCTGTTGGGTAAGATCAAGCGCATCAATCATCTCGTGGTGTTAGCGTG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (12-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	95.865	100	0.959
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	48.23	84.962	0.41