Detailed information    

insolico Bioinformatically predicted

Overview


Name   stkP   Type   Regulator
Locus tag   R0492_RS09085 Genome accession   NZ_CP136649
Coordinates   1763481..1765454 (+) Length   657 a.a.
NCBI ID   WP_003181678.1    Uniprot ID   Q65JS1
Organism   Bacillus licheniformis strain NXU98     
Function   require for competence development; phosphorylate ComE (predicted from homology)   
Competence regulation

Genomic Context


Location: 1758481..1770454
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  R0492_RS09060 def 1758857..1759339 (+) 483 WP_009328532.1 peptide deformylase -
  R0492_RS09065 fmt 1759344..1760294 (+) 951 WP_003181670.1 methionyl-tRNA formyltransferase -
  R0492_RS09070 rsmB 1760284..1761630 (+) 1347 WP_003181671.1 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB -
  R0492_RS09075 rlmN 1761630..1762715 (+) 1086 WP_003181673.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  R0492_RS09080 - 1762723..1763487 (+) 765 WP_003181675.1 Stp1/IreP family PP2C-type Ser/Thr phosphatase -
  R0492_RS09085 stkP 1763481..1765454 (+) 1974 WP_003181678.1 Stk1 family PASTA domain-containing Ser/Thr kinase Regulator
  R0492_RS09090 rsgA 1765467..1766351 (+) 885 WP_003181680.1 ribosome small subunit-dependent GTPase A -
  R0492_RS09095 rpe 1766355..1767011 (+) 657 WP_003181681.1 ribulose-phosphate 3-epimerase -
  R0492_RS09100 - 1767087..1767731 (+) 645 WP_003181683.1 thiamine diphosphokinase -
  R0492_RS09105 spoVM 1767817..1767897 (+) 81 WP_003221545.1 stage V sporulation protein SpoVM -
  R0492_RS09110 rpmB 1768002..1768190 (-) 189 WP_003181685.1 50S ribosomal protein L28 -
  R0492_RS09115 - 1768478..1768840 (+) 363 WP_003181687.1 Asp23/Gls24 family envelope stress response protein -

Sequence


Protein


Download         Length: 657 a.a.        Molecular weight: 72686.52 Da        Isoelectric Point: 4.8627

>NTDB_id=815360 R0492_RS09085 WP_003181678.1 1763481..1765454(+) (stkP) [Bacillus licheniformis strain NXU98]
MLIGRRISGRYEILRAIGGGGMANVYLALDIILDREVAIKVLRFDFVHDADFIRRFRREAQSAASLDHPNIVSIYDVGEE
DDIYYIVMEYVEGMTLKEYINRTGPLHPKEAVQIMEQIVSAIAHAHDNQIVHRDIKPHNILIDHMGHIKVTDFGIAMALS
STTITHTNSVLGSVHYLSPEQARGGLSTKKSDIYSLGIVLFELLTARMPFEGESAVSIALKHLQSETPSVKRWNPAVPQS
IENVVLKAMAKDPFHRYEAAEEMENDLKTAFDPDRLNEKRFTIPSDDEMTKAVPIIKNLPENGSSSQSGGGEEEAAPLSK
KEKKKQAKANKKKKRKKWPLILLTVFFVLAASAVLALTVFPSLFIPKDVAVPDVAGLEYEEAVIKLEDEGFEVDPNAEDI
ADDKIEEGLIVKTDPAAGDIVKEGSTVKLYKSSGKEKTEVDDVVGQKVDAAKKLLEQKGFKNIKTEEVHDEEEAGTIIEQ
DPAAGTEIVAADDEVKLTVSLGPEAITLRDLKTYSKQAASGYLDDHQLVLVEKEAHSEDVPEGQVIKQKPEAGASVKPGD
KVEVTFSLGPKQKPVKTVTEKIDIPYEPGAAGEEQNVQISIDDEEHSISDVYENFKITAPAERTIKFRIAPGQKGYYQVT
INDKVVRSKTIEYPEDE

Nucleotide


Download         Length: 1974 bp        

>NTDB_id=815360 R0492_RS09085 WP_003181678.1 1763481..1765454(+) (stkP) [Bacillus licheniformis strain NXU98]
GTGTTAATCGGCAGACGGATCAGCGGACGTTACGAAATCCTGCGCGCCATCGGCGGCGGGGGGATGGCGAACGTTTATTT
AGCGCTGGACATCATCCTCGACCGTGAAGTCGCGATTAAAGTGCTGCGGTTTGACTTCGTTCACGATGCCGATTTTATCA
GGCGGTTCAGACGGGAAGCGCAGTCCGCTGCAAGCCTCGACCACCCGAATATCGTCAGCATTTATGATGTCGGAGAAGAA
GATGACATCTATTATATCGTGATGGAGTATGTCGAGGGGATGACCCTGAAAGAATACATAAATCGAACAGGCCCACTTCA
TCCGAAAGAAGCGGTCCAAATCATGGAGCAGATCGTATCCGCCATCGCACATGCCCATGATAACCAGATTGTCCACCGGG
ATATTAAGCCCCACAACATTTTGATCGACCATATGGGCCACATTAAAGTGACTGATTTCGGCATCGCCATGGCGCTCAGC
TCGACGACCATCACGCACACCAACTCGGTTTTGGGCTCTGTCCATTATTTGTCGCCCGAACAGGCGAGAGGCGGATTATC
GACGAAAAAATCCGATATCTACTCGCTCGGCATCGTGCTTTTCGAGCTGCTGACGGCGCGTATGCCGTTTGAAGGAGAAT
CGGCGGTCAGCATCGCGCTGAAACATCTCCAATCAGAAACGCCGTCGGTGAAAAGATGGAACCCGGCCGTGCCGCAAAGC
ATAGAAAACGTCGTCCTGAAAGCGATGGCAAAAGATCCATTCCATCGCTATGAAGCGGCCGAAGAGATGGAAAACGATTT
GAAAACGGCTTTCGACCCGGACCGGCTCAACGAAAAGCGCTTCACGATTCCATCCGATGATGAGATGACGAAAGCAGTTC
CGATCATCAAGAATCTGCCGGAAAACGGGAGCAGCTCGCAATCCGGCGGCGGAGAAGAGGAAGCGGCTCCATTATCAAAA
AAAGAAAAGAAGAAGCAGGCAAAAGCAAACAAGAAGAAAAAAAGAAAGAAATGGCCGCTTATATTGCTGACGGTGTTTTT
CGTTCTGGCTGCGTCAGCCGTCTTGGCTTTAACGGTGTTTCCGTCGCTCTTTATTCCGAAAGATGTGGCCGTTCCCGATG
TTGCCGGCCTTGAATATGAAGAAGCCGTCATCAAGCTTGAAGACGAAGGATTTGAAGTTGATCCGAATGCTGAAGACATT
GCCGACGATAAAATTGAAGAAGGGCTGATCGTGAAGACGGACCCTGCAGCCGGCGATATCGTGAAGGAAGGTTCAACTGT
CAAGCTATATAAAAGCTCAGGCAAAGAGAAAACTGAAGTCGATGATGTGGTCGGCCAGAAAGTCGATGCCGCCAAGAAGC
TTCTTGAGCAAAAAGGCTTTAAAAACATCAAGACAGAAGAAGTGCACGATGAAGAAGAAGCGGGAACCATCATCGAACAG
GACCCTGCAGCCGGAACCGAAATCGTTGCCGCCGACGACGAGGTCAAATTAACGGTCAGCCTCGGTCCGGAAGCCATTAC
TTTAAGGGATTTAAAAACATACAGCAAACAGGCGGCTTCGGGCTATTTGGACGACCATCAGCTTGTCCTTGTCGAAAAGG
AGGCGCATTCTGAAGACGTGCCGGAAGGTCAGGTCATTAAACAAAAGCCGGAGGCGGGGGCATCAGTCAAGCCGGGAGAC
AAAGTCGAGGTCACGTTTTCGCTCGGACCTAAACAAAAGCCCGTCAAAACGGTGACCGAGAAAATTGATATTCCTTATGA
ACCGGGAGCGGCGGGCGAAGAACAAAACGTCCAAATTTCGATCGATGATGAAGAACACAGCATTTCTGACGTCTACGAAA
ATTTCAAAATCACAGCGCCGGCAGAGCGGACGATCAAATTCAGGATTGCGCCCGGCCAAAAAGGGTATTATCAAGTAACG
ATCAACGATAAAGTAGTCAGGTCAAAAACGATTGAATATCCTGAGGATGAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q65JS1

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  stkP Streptococcus pneumoniae TIGR4

41.356

89.802

0.371

  stkP Streptococcus pneumoniae D39

41.186

89.802

0.37

  stkP Streptococcus pneumoniae R6

41.186

89.802

0.37

  stkP Streptococcus pneumoniae Rx1

41.017

89.802

0.368