Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   QA442_RS20410 Genome accession   NZ_CP121861
Coordinates   3936966..3937916 (-) Length   316 a.a.
NCBI ID   WP_014662773.1    Uniprot ID   A0A292GGZ9
Organism   Bacillus stercoris strain Mal05     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3931966..3942916
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QA442_RS20390 (QA442_20390) - 3933183..3934118 (-) 936 WP_095432787.1 restriction endonuclease -
  QA442_RS20395 (QA442_20395) yclQ 3934299..3935252 (-) 954 WP_014662776.1 petrobactin ABC transporter substrate-binding protein YclQ -
  QA442_RS20400 (QA442_20400) yclP 3935274..3936032 (-) 759 WP_095432788.1 petrobactin ABC transporter ATP-binding protein YclP -
  QA442_RS20405 (QA442_20405) yclO 3936026..3936973 (-) 948 WP_040084169.1 petrobactin ABC transporter permease YclO -
  QA442_RS20410 (QA442_20410) ceuB 3936966..3937916 (-) 951 WP_014662773.1 petrobactin ABC transporter permease YclN Machinery gene
  QA442_RS20415 (QA442_20415) - 3938301..3939665 (+) 1365 WP_069839855.1 aspartate kinase -
  QA442_RS20420 (QA442_20420) - 3939808..3939918 (+) 111 WP_040084173.1 YjcZ family sporulation protein -
  QA442_RS20425 (QA442_20425) phrC 3940016..3940138 (-) 123 WP_014662771.1 phosphatase RapC inhibitor PhrC Regulator
  QA442_RS20430 (QA442_20430) rapC 3940122..3941270 (-) 1149 WP_095432789.1 response regulator aspartate phosphatase RapC Regulator
  QA442_RS20435 (QA442_20435) yclK 3941433..3942854 (-) 1422 WP_095432790.1 two-component system sensor histidine kinase YclK -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34857.25 Da        Isoelectric Point: 9.9364

>NTDB_id=814937 QA442_RS20410 WP_014662773.1 3936966..3937916(-) (ceuB) [Bacillus stercoris strain Mal05]
MKLRYLFILLIILAVTSVFIGVEDLSPLDLFDLSKQEASTLFASRLPRLISIVIAGLSMSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLIKMLVAFVFALAGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTLAGMGESFSVNLGLKYKRVVNIGLIIVSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKSSLPHTALLGAVFVLFCDILGRVIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=814937 QA442_RS20410 WP_014662773.1 3936966..3937916(-) (ceuB) [Bacillus stercoris strain Mal05]
ATGAAGCTACGTTATTTATTTATTCTACTTATCATATTAGCCGTCACATCTGTATTTATCGGCGTAGAAGATCTGTCGCC
GCTTGATCTCTTCGATTTAAGCAAACAAGAGGCGTCAACGCTGTTTGCAAGCCGTTTGCCGCGATTAATCAGCATTGTCA
TCGCGGGCTTAAGCATGAGCATCTGCGGTTTGATTATGCAGCAGATCAGCAGAAACAAATTCGTGTCACCGACGACGGCG
GGCACGATGGATTGGGCTCGGCTCGGCATCTTAATTTCCTTGCTGCTGTTTACATCCGCCAGTCCTTTAATCAAAATGCT
GGTCGCGTTTGTCTTTGCCCTGGCAGGCAACTTCCTGTTTATGAAAATCCTTGAAAGAATCAAGTTTAACGACACCATCT
TTATTCCGCTTGTCGGTTTAATGCTCGGGAATATCGTCAGTTCAATCGCGACTTTTATCGCGTATAAATATGACTTGATC
CAGAACGTGTCATCATGGCTTCAGGGAGACTTCTCCTTAGTCGTGAAAGGGAGATACGAGCTTCTTTATCTGAGTATTCC
GCTCGTTATCATTGCCTATGTGTATGCGGATAAATTCACATTGGCCGGTATGGGAGAAAGCTTTTCTGTCAATCTCGGCC
TAAAGTACAAGCGGGTAGTGAACATCGGGCTCATTATCGTATCCCTGATCACGTCTCTTGTCATTTTGACTGTCGGTATG
CTGCCGTTTCTCGGTTTAATCATCCCGAATATTGTATCGATTTACAGAGGAGACAATCTGAAGAGCAGCCTGCCGCATAC
TGCGCTATTGGGAGCGGTTTTTGTGCTGTTTTGCGATATATTGGGCAGAGTCATTATCTTCCCTTACGAAATCTCGATTG
GCCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCGTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A292GGZ9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.532

100

0.525