Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | QA442_RS09340 | Genome accession | NZ_CP121861 |
| Coordinates | 1786994..1788031 (+) | Length | 345 a.a. |
| NCBI ID | WP_095431687.1 | Uniprot ID | - |
| Organism | Bacillus stercoris strain Mal05 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1781994..1793031
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QA442_RS09320 (QA442_09320) | - | 1782819..1784147 (-) | 1329 | WP_095431740.1 | hemolysin family protein | - |
| QA442_RS09325 (QA442_09325) | corA | 1784290..1785243 (+) | 954 | WP_279474190.1 | magnesium transporter CorA | - |
| QA442_RS09330 (QA442_09330) | - | 1785306..1785724 (+) | 419 | Protein_1802 | CBS domain-containing protein | - |
| QA442_RS09335 (QA442_09335) | comGA | 1785937..1787007 (+) | 1071 | WP_095431688.1 | competence protein ComGA | Machinery gene |
| QA442_RS09340 (QA442_09340) | comGB | 1786994..1788031 (+) | 1038 | WP_095431687.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| QA442_RS09345 (QA442_09345) | comGC | 1788045..1788341 (+) | 297 | WP_003230162.1 | comG operon protein ComGC | Machinery gene |
| QA442_RS09350 (QA442_09350) | comGD | 1788331..1788762 (+) | 432 | WP_095431686.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| QA442_RS09355 (QA442_09355) | comGE | 1788746..1789087 (+) | 342 | WP_095431685.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| QA442_RS09360 (QA442_09360) | comGF | 1789113..1789493 (+) | 381 | WP_095431684.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| QA442_RS09365 (QA442_09365) | comGG | 1789494..1789868 (+) | 375 | WP_040082643.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| QA442_RS09370 (QA442_09370) | - | 1789940..1790119 (+) | 180 | WP_014480252.1 | YqzE family protein | - |
| QA442_RS09375 (QA442_09375) | - | 1790160..1790486 (-) | 327 | WP_014664589.1 | YqzG/YhdC family protein | - |
| QA442_RS09380 (QA442_09380) | tapA | 1790758..1791513 (+) | 756 | WP_095431683.1 | amyloid fiber anchoring/assembly protein TapA | - |
| QA442_RS09385 (QA442_09385) | - | 1791497..1792069 (+) | 573 | WP_014664587.1 | signal peptidase I | - |
| QA442_RS09390 (QA442_09390) | tasA | 1792133..1792918 (+) | 786 | WP_095431682.1 | biofilm matrix protein TasA | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 40042.48 Da Isoelectric Point: 9.9690
>NTDB_id=814902 QA442_RS09340 WP_095431687.1 1786994..1788031(+) (comGB) [Bacillus stercoris strain Mal05]
MKKIRKTWPLKDQARLLKRLGEMTASGYTLLDGLRLMELQMNKRQSADLTDTVTRLREGTPFYQVLKRLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLILFSAGIGIYYWFVFKKKSPARKMLICVRIPFVGKLVRLFNSYFFSLQLSSLLKSGLSIYDSLHAFKHQT
FLPFYRCEAEHVIERLKAGESIEAAICGSPFFETDFSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPIIY
GFVAAMILIVYLSMLLPMYQMMNQM
MKKIRKTWPLKDQARLLKRLGEMTASGYTLLDGLRLMELQMNKRQSADLTDTVTRLREGTPFYQVLKRLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLILFSAGIGIYYWFVFKKKSPARKMLICVRIPFVGKLVRLFNSYFFSLQLSSLLKSGLSIYDSLHAFKHQT
FLPFYRCEAEHVIERLKAGESIEAAICGSPFFETDFSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPIIY
GFVAAMILIVYLSMLLPMYQMMNQM
Nucleotide
Download Length: 1038 bp
>NTDB_id=814902 QA442_RS09340 WP_095431687.1 1786994..1788031(+) (comGB) [Bacillus stercoris strain Mal05]
ATGAAAAAGATTAGAAAAACCTGGCCGTTAAAGGATCAGGCCCGGTTATTAAAGCGGCTCGGAGAAATGACGGCAAGCGG
ATATACACTTCTGGATGGATTGCGCCTGATGGAACTTCAGATGAATAAGAGGCAGTCAGCTGACTTGACTGACACGGTCA
CTCGTTTGAGGGAAGGGACTCCGTTTTATCAAGTCTTAAAGCGTTTGTCATTTCATAAGGAAGCTGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCCTCCATGATCCAGAGCGGAGAGCTGCTTGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGGGTGCTGCGCTATCCGCTTTTCCTCATCTTCACCGTTGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAATTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTGATTCTTTTTTCAGCTGGTATCGGGATTTATTATTGGTTTGTGTTTAAGAA
AAAATCACCTGCTAGGAAAATGCTTATTTGTGTCAGGATTCCTTTTGTCGGAAAGCTTGTCAGGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCCATTTATGACAGCCTTCATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGTTGCGAGGCAGAACACGTGATTGAACGGCTAAAAGCCGGTGAATCAATTGAAGCGGCTATTTG
TGGGAGCCCCTTTTTTGAAACTGATTTTTCAAAAGTCATATCCCATGGCCAGCTGAGCGGCCGTCTAGATCGTGAACTTT
TCACATACAGCCAGTTCATATTGCAGCGGCTGGAGCACAAGGCGCAAAAATGGACAGGCATCCTTCAGCCGATAATTTAT
GGATTTGTTGCTGCAATGATCTTAATTGTGTATTTATCTATGCTTTTGCCTATGTATCAGATGATGAATCAAATGTGA
ATGAAAAAGATTAGAAAAACCTGGCCGTTAAAGGATCAGGCCCGGTTATTAAAGCGGCTCGGAGAAATGACGGCAAGCGG
ATATACACTTCTGGATGGATTGCGCCTGATGGAACTTCAGATGAATAAGAGGCAGTCAGCTGACTTGACTGACACGGTCA
CTCGTTTGAGGGAAGGGACTCCGTTTTATCAAGTCTTAAAGCGTTTGTCATTTCATAAGGAAGCTGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCCTCCATGATCCAGAGCGGAGAGCTGCTTGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGGGTGCTGCGCTATCCGCTTTTCCTCATCTTCACCGTTGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAATTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTGATTCTTTTTTCAGCTGGTATCGGGATTTATTATTGGTTTGTGTTTAAGAA
AAAATCACCTGCTAGGAAAATGCTTATTTGTGTCAGGATTCCTTTTGTCGGAAAGCTTGTCAGGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCCATTTATGACAGCCTTCATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGTTGCGAGGCAGAACACGTGATTGAACGGCTAAAAGCCGGTGAATCAATTGAAGCGGCTATTTG
TGGGAGCCCCTTTTTTGAAACTGATTTTTCAAAAGTCATATCCCATGGCCAGCTGAGCGGCCGTCTAGATCGTGAACTTT
TCACATACAGCCAGTTCATATTGCAGCGGCTGGAGCACAAGGCGCAAAAATGGACAGGCATCCTTCAGCCGATAATTTAT
GGATTTGTTGCTGCAATGATCTTAATTGTGTATTTATCTATGCTTTTGCCTATGTATCAGATGATGAATCAAATGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Bacillus subtilis subsp. subtilis str. 168 |
92.879 |
93.623 |
0.87 |