Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   QA442_RS05900 Genome accession   NZ_CP121861
Coordinates   1140910..1143210 (+) Length   766 a.a.
NCBI ID   WP_251198651.1    Uniprot ID   -
Organism   Bacillus stercoris strain Mal05     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 1135910..1148210
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QA442_RS05870 (QA442_05870) pdeH 1137502..1138731 (+) 1230 WP_014665194.1 cyclic di-GMP phosphodiesterase -
  QA442_RS05875 (QA442_05875) - 1138707..1139075 (-) 369 WP_014665193.1 hypothetical protein -
  QA442_RS05880 (QA442_05880) - 1139190..1139315 (-) 126 WP_128422565.1 hypothetical protein -
  QA442_RS05885 (QA442_05885) degQ 1139537..1139677 (+) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  QA442_RS05890 (QA442_05890) - 1139861..1140721 (+) 861 WP_095431805.1 polyprenyl synthetase family protein -
  QA442_RS05895 (QA442_05895) comX 1140734..1140898 (+) 165 WP_014665191.1 competence pheromone ComX -
  QA442_RS05900 (QA442_05900) comP 1140910..1143210 (+) 2301 WP_251198651.1 histidine kinase Regulator
  QA442_RS05905 (QA442_05905) comA 1143291..1143935 (+) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  QA442_RS05910 (QA442_05910) - 1143954..1144334 (+) 381 WP_040081970.1 hotdog fold thioesterase -
  QA442_RS05915 (QA442_05915) mnhG 1144373..1144747 (-) 375 WP_014665188.1 monovalent cation/H(+) antiporter subunit G -
  QA442_RS05920 (QA442_05920) - 1144731..1145015 (-) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  QA442_RS05925 (QA442_05925) - 1145015..1145491 (-) 477 WP_014665187.1 Na+/H+ antiporter subunit E -
  QA442_RS05930 (QA442_05930) - 1145497..1146978 (-) 1482 WP_095431803.1 Na+/H+ antiporter subunit D -
  QA442_RS05935 (QA442_05935) - 1146971..1147312 (-) 342 WP_003220730.1 Na(+)/H(+) antiporter subunit C -
  QA442_RS05940 (QA442_05940) - 1147312..1147743 (-) 432 WP_014665185.1 Na(+)/H(+) antiporter subunit B -

Sequence


Protein


Download         Length: 766 a.a.        Molecular weight: 88432.49 Da        Isoelectric Point: 7.4306

>NTDB_id=814887 QA442_RS05900 WP_251198651.1 1140910..1143210(+) (comP) [Bacillus stercoris strain Mal05]
MKAWYNKVSIILILVSLVYVTYLTYISSSKLLVGAAVAENQDNEVVITNIEEFSTAYYSGIQKGDVIKSINNQKVKRPLE
VQKYNSNHVSSIVVERDGEKVRIKPDLMNDGNFTTFVIPLIFYIACLFCCFFILKINESKKLLSALILIVFLLSASLAYL
SAGGSAKGDWLSRCIMVFTLTSVMFNYLLFLYQYFKELGTVLFNKKVFILYAIPILNLVFELLRTQLFFRHYVPKINLLS
FFISFIIVSVYFGSILIKSKDTEQAHIIKVLTIINILSFSPFLFLYIIPYVFLSTDGISSFIAASFMFLIPFSLVYQFMT
NKIYNVDFILSRLKYYGILALTPTIILVTVFELIGNPAGDFYYFRLAILIYIIMVAVFYYKEVLDFRFRLKRVSEKFNYQ
DSIYKFTQMIRDSTSLTQVFEELKNTILEVSLVSRAHVYEVSADASIELYDDANVNSFEKVYQKEFRKVTSEIGKIVEFN
KGFVMKIGERGGKSFVMLCLSKMNTPRLTLEELSWLKTLAFYTNVSIENVMKIEELMSHLEEIKQQESNPVWLKKLMYTI
EEKQRSDLARDLHDSVLQDLISLKRQCELFLGDFKKDDNPCREEVQDKLVQMNEQMSDVISMTRETCHELRPQLLYDLGL
VKALSKLVAQQQERVPFHIRLNTGRFTASLDLDSQLNLYRIIQEFLSNAVKHSQATDVLIMLISIQNKIVLHYEDDGVGF
DLEKNTEHSMSMGLSGIKERVRALDGRLRIETSEGKGFKADIEIEL

Nucleotide


Download         Length: 2301 bp        

>NTDB_id=814887 QA442_RS05900 WP_251198651.1 1140910..1143210(+) (comP) [Bacillus stercoris strain Mal05]
ATGAAGGCATGGTACAACAAAGTTTCAATTATTTTGATTTTAGTCAGTTTAGTCTATGTAACTTATTTAACGTATATAAG
TTCGAGTAAACTTTTAGTTGGTGCAGCAGTAGCCGAAAATCAAGACAATGAAGTCGTAATAACAAATATTGAGGAATTTT
CTACGGCTTATTACTCAGGCATACAAAAAGGGGACGTCATCAAAAGTATCAATAATCAAAAAGTTAAGCGTCCTCTTGAA
GTTCAAAAATATAATTCAAACCATGTGAGTTCAATAGTCGTCGAGAGAGATGGAGAAAAGGTTAGAATTAAGCCTGATTT
AATGAATGATGGGAATTTTACTACTTTTGTTATCCCACTAATATTTTATATAGCCTGTCTATTTTGTTGTTTCTTCATTC
TAAAAATAAATGAATCGAAAAAACTACTATCTGCTTTGATTTTAATCGTTTTCTTGTTATCAGCTTCTTTAGCATACTTA
AGTGCGGGCGGATCTGCAAAGGGGGATTGGTTAAGCAGATGTATAATGGTATTCACTTTAACATCTGTAATGTTTAACTA
TCTTCTTTTCTTGTATCAGTATTTTAAAGAACTAGGCACTGTGTTATTTAACAAAAAAGTTTTTATACTATATGCAATTC
CAATACTAAATCTAGTTTTTGAATTGTTGCGAACTCAGCTTTTCTTTAGACATTATGTGCCTAAAATAAATTTACTTTCG
TTCTTTATTTCATTTATAATCGTGAGCGTATATTTTGGATCTATTTTAATTAAAAGTAAGGATACTGAACAAGCACATAT
TATAAAAGTTCTTACCATAATTAATATCTTATCTTTTTCGCCGTTTTTGTTTTTATATATAATACCTTATGTATTCTTAA
GCACTGATGGAATTTCTTCTTTTATAGCTGCTTCATTTATGTTCCTAATACCATTTTCTTTGGTTTATCAATTTATGACA
AATAAAATTTATAATGTGGATTTTATTTTAAGTAGGTTAAAATATTATGGAATATTAGCATTAACGCCCACAATTATTTT
AGTTACGGTATTTGAGTTAATAGGAAATCCAGCTGGAGATTTCTATTATTTTAGACTGGCGATTCTGATATATATTATTA
TGGTGGCTGTTTTTTATTATAAAGAAGTACTTGATTTCAGATTTAGATTAAAAAGGGTCTCGGAAAAATTCAATTATCAA
GACAGTATATATAAATTCACGCAGATGATTAGAGACTCAACTTCCTTGACTCAAGTATTTGAAGAACTGAAAAATACTAT
ACTTGAAGTCTCTCTTGTTAGCCGAGCACATGTATATGAAGTTTCAGCTGACGCAAGTATTGAACTATATGATGATGCGA
ACGTAAATTCATTTGAAAAAGTCTATCAAAAAGAATTTAGAAAAGTAACATCCGAAATAGGGAAAATCGTTGAATTTAAT
AAAGGTTTTGTCATGAAGATAGGTGAACGCGGTGGGAAATCATTTGTAATGCTTTGTTTATCTAAAATGAATACGCCCCG
TCTTACACTTGAAGAACTTTCTTGGCTGAAAACATTGGCTTTTTATACAAACGTATCGATCGAAAACGTCATGAAAATTG
AAGAACTGATGAGTCATTTAGAAGAAATAAAACAACAAGAATCCAACCCCGTATGGCTCAAAAAACTCATGTACACGATC
GAGGAAAAACAACGCTCCGATCTCGCCCGCGATCTCCACGATTCGGTTCTTCAGGACTTGATTTCCTTAAAACGCCAGTG
TGAGCTGTTTTTGGGTGATTTTAAAAAGGATGACAATCCGTGCCGTGAAGAAGTGCAGGACAAGCTTGTACAGATGAATG
AGCAGATGTCAGATGTGATTTCGATGACGAGGGAGACGTGTCATGAGCTGCGGCCGCAGCTTCTGTATGATCTTGGATTG
GTGAAGGCGCTGTCGAAGCTGGTGGCGCAGCAGCAGGAGCGGGTTCCGTTTCATATTCGTTTAAATACCGGGAGATTTAC
GGCTTCCCTTGATCTGGATTCGCAGCTGAATTTGTACCGGATCATTCAAGAGTTTCTGTCTAATGCGGTCAAGCACTCTC
AGGCGACGGATGTGCTGATTATGCTCATCAGTATACAAAACAAAATTGTTCTTCATTATGAGGACGATGGCGTAGGGTTT
GACCTTGAAAAAAATACTGAACATTCCATGAGCATGGGGCTTTCTGGCATTAAGGAGAGAGTCAGGGCTTTAGATGGGCG
CCTTCGGATTGAAACGAGTGAAGGAAAGGGCTTTAAGGCTGATATTGAAATCGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

58.036

100

0.594