Detailed information
Bioinformatically predicted
Overview
| Name | pptB | Type | Regulator |
| Locus tag | R8775_RS02640 | Genome accession | NZ_AP026915 |
| Coordinates | 500938..501987 (+) | Length | 349 a.a. |
| NCBI ID | WP_000653751.1 | Uniprot ID | - |
| Organism | Streptococcus pneumoniae strain PZ900700005 | ||
| Function | export ComS (predicted from homology) Competence regulation |
||
Genomic Context
Location: 495938..506987
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| R8775_RS02610 (PC0005_05090) | - | 497063..497416 (+) | 354 | WP_000115730.1 | hypothetical protein | - |
| R8775_RS02615 (PC0005_05100) | dnaJ | 497621..498757 (+) | 1137 | WP_001836079.1 | molecular chaperone DnaJ | - |
| R8775_RS02620 | - | 499079..499273 (-) | 195 | WP_001808905.1 | hypothetical protein | - |
| R8775_RS02625 (PC0005_05110) | - | 499435..499722 (-) | 288 | WP_000777753.1 | hypothetical protein | - |
| R8775_RS02630 (PC0005_05120) | - | 499732..500142 (-) | 411 | WP_001278304.1 | HIT family protein | - |
| R8775_RS02635 (PC0005_05130) | pptA | 500210..500941 (+) | 732 | WP_000889923.1 | ABC transporter ATP-binding protein | Regulator |
| R8775_RS02640 (PC0005_05140) | pptB | 500938..501987 (+) | 1050 | WP_000653751.1 | ABC transporter permease | Regulator |
| R8775_RS02645 (PC0005_05150) | - | 502155..502484 (-) | 330 | WP_000132572.1 | hypothetical protein | - |
| R8775_RS02650 (PC0005_05160) | - | 502761..503099 (+) | 339 | WP_044792896.1 | LytTR family DNA-binding domain-containing protein | - |
| R8775_RS02655 (PC0005_05170) | comE/blpR | 503104..503841 (+) | 738 | WP_001219137.1 | LytTR family DNA-binding domain-containing protein | Regulator |
| R8775_RS02660 (PC0005_05180) | - | 503855..505195 (+) | 1341 | WP_001099893.1 | sensor histidine kinase | - |
| R8775_RS02665 (PC0005_05190) | blpC | 505239..505394 (-) | 156 | WP_000358811.1 | quorum-sensing system pheromone BlpC | - |
| R8775_RS02670 (PC0005_05200) | - | 505451..506812 (-) | 1362 | WP_050233594.1 | bacteriocin secretion accessory protein | - |
| R8775_RS02675 (PC0005_05210) | comA/nlmT | 506823..506987 (-) | 165 | WP_306420852.1 | hypothetical protein | Regulator |
Sequence
Protein
Download Length: 349 a.a. Molecular weight: 40544.67 Da Isoelectric Point: 10.0027
>NTDB_id=81456 R8775_RS02640 WP_000653751.1 500938..501987(+) (pptB) [Streptococcus pneumoniae strain PZ900700005]
MKDLFLKRKQAFRKECLCYLRYVLNDHFVLFLLVLLGFLAYQYSQLLQHFPENHWPILLFVGITSVLLLLWGGIATYMEA
PDKLFLLVGEEAIKLHLKRQTGISLVFWLFVQTLFLLLFAPLFLAMGYGLPVFLLYVLLLGVGKYFHFRQKASKFFTETG
LDWDYVISQESKRKQVLLRFFALFTQVKGISNSVKRRAYLDFILKAVQKVPGKIWQNLYLRSYLRNGDLFALSLRLLLLS
VLAQVFIEQAWIATAVVVLFNYLLLFQLLALYHAFDYQYLTQLFPLDKGQKEKGLQEVVRGLTSFVLLVELVVGLITFQE
KLALLALLGAGLVLLVLYLPYQVKRQMQD
MKDLFLKRKQAFRKECLCYLRYVLNDHFVLFLLVLLGFLAYQYSQLLQHFPENHWPILLFVGITSVLLLLWGGIATYMEA
PDKLFLLVGEEAIKLHLKRQTGISLVFWLFVQTLFLLLFAPLFLAMGYGLPVFLLYVLLLGVGKYFHFRQKASKFFTETG
LDWDYVISQESKRKQVLLRFFALFTQVKGISNSVKRRAYLDFILKAVQKVPGKIWQNLYLRSYLRNGDLFALSLRLLLLS
VLAQVFIEQAWIATAVVVLFNYLLLFQLLALYHAFDYQYLTQLFPLDKGQKEKGLQEVVRGLTSFVLLVELVVGLITFQE
KLALLALLGAGLVLLVLYLPYQVKRQMQD
Nucleotide
Download Length: 1050 bp
>NTDB_id=81456 R8775_RS02640 WP_000653751.1 500938..501987(+) (pptB) [Streptococcus pneumoniae strain PZ900700005]
ATGAAAGACTTGTTTTTAAAGAGAAAGCAGGCCTTTCGTAAGGAGTGTCTTTGTTATCTGCGCTATGTGCTCAATGACCA
CTTTGTCTTGTTCCTGCTTGTCCTGTTGGGCTTTCTAGCCTACCAGTACAGTCAACTCTTACAACATTTTCCTGAAAATC
ATTGGCCTATCCTTTTGTTTGTAGGAATTACGTCTGTTTTACTCTTACTTTGGGGAGGAATTGCCACCTATATGGAGGCT
CCAGACAAGCTCTTTCTCTTAGTTGGAGAAGAGGCAATCAAGCTCCATCTCAAGCGTCAAACTGGCATTTCCCTAGTCTT
TTGGCTCTTTGTACAGACCCTTTTCTTGCTGTTATTTGCGCCTTTATTTTTAGCAATGGGTTATGGCTTGCCAGTTTTTC
TGCTATATGTGCTTTTATTGGGGGTAGGAAAATATTTCCACTTTCGTCAAAAGGCCAGCAAATTTTTTACTGAAACTGGA
CTGGACTGGGACTATGTTATTTCTCAAGAAAGCAAGCGTAAGCAAGTCTTGCTTCGTTTCTTTGCCCTCTTTACGCAGGT
CAAGGGAATTTCAAACAGCGTTAAGCGTCGTGCCTATCTGGACTTTATCTTAAAGGCTGTTCAGAAGGTGCCTGGGAAGA
TTTGGCAAAATCTCTATCTGCGTTCTTATCTGCGAAATGGCGACCTCTTTGCTCTCAGTCTTCGTCTTCTCTTACTTTCC
GTACTGGCGCAGGTTTTTATCGAGCAAGCTTGGATTGCGACAGCAGTGGTAGTTCTCTTTAACTACCTCTTGCTCTTCCA
GTTGCTGGCCCTCTATCATGCCTTTGACTACCAGTATTTGACCCAACTCTTTCCGCTGGACAAGGGGCAAAAGGAAAAAG
GCTTACAGGAGGTAGTTCGAGGATTGACCAGTTTTGTTTTACTTGTGGAATTAGTTGTTGGGTTGATTACCTTCCAAGAA
AAACTGGCCCTTCTAGCCTTACTAGGAGCTGGTTTGGTTTTACTAGTCTTGTATTTGCCTTATCAGGTAAAACGTCAGAT
GCAGGACTAA
ATGAAAGACTTGTTTTTAAAGAGAAAGCAGGCCTTTCGTAAGGAGTGTCTTTGTTATCTGCGCTATGTGCTCAATGACCA
CTTTGTCTTGTTCCTGCTTGTCCTGTTGGGCTTTCTAGCCTACCAGTACAGTCAACTCTTACAACATTTTCCTGAAAATC
ATTGGCCTATCCTTTTGTTTGTAGGAATTACGTCTGTTTTACTCTTACTTTGGGGAGGAATTGCCACCTATATGGAGGCT
CCAGACAAGCTCTTTCTCTTAGTTGGAGAAGAGGCAATCAAGCTCCATCTCAAGCGTCAAACTGGCATTTCCCTAGTCTT
TTGGCTCTTTGTACAGACCCTTTTCTTGCTGTTATTTGCGCCTTTATTTTTAGCAATGGGTTATGGCTTGCCAGTTTTTC
TGCTATATGTGCTTTTATTGGGGGTAGGAAAATATTTCCACTTTCGTCAAAAGGCCAGCAAATTTTTTACTGAAACTGGA
CTGGACTGGGACTATGTTATTTCTCAAGAAAGCAAGCGTAAGCAAGTCTTGCTTCGTTTCTTTGCCCTCTTTACGCAGGT
CAAGGGAATTTCAAACAGCGTTAAGCGTCGTGCCTATCTGGACTTTATCTTAAAGGCTGTTCAGAAGGTGCCTGGGAAGA
TTTGGCAAAATCTCTATCTGCGTTCTTATCTGCGAAATGGCGACCTCTTTGCTCTCAGTCTTCGTCTTCTCTTACTTTCC
GTACTGGCGCAGGTTTTTATCGAGCAAGCTTGGATTGCGACAGCAGTGGTAGTTCTCTTTAACTACCTCTTGCTCTTCCA
GTTGCTGGCCCTCTATCATGCCTTTGACTACCAGTATTTGACCCAACTCTTTCCGCTGGACAAGGGGCAAAAGGAAAAAG
GCTTACAGGAGGTAGTTCGAGGATTGACCAGTTTTGTTTTACTTGTGGAATTAGTTGTTGGGTTGATTACCTTCCAAGAA
AAACTGGCCCTTCTAGCCTTACTAGGAGCTGGTTTGGTTTTACTAGTCTTGTATTTGCCTTATCAGGTAAAACGTCAGAT
GCAGGACTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pptB | Streptococcus salivarius strain HSISS4 |
47.429 |
100 |
0.476 |
| pptB | Streptococcus thermophilus LMD-9 |
46.571 |
100 |
0.467 |