Detailed information NTG0814168

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: QBJ73_RS08290
• Genome accession: NZ_CP121776
• Coordinates: 1744856..1746220 (-)
• Length: 454 a.a.
• NCBI ID: WP_308469656.1
• Uniprot ID: -
• Organism: Acinetobacter johnsonii strain AYTCM
• Function: regulation of type IV pilus assembly (predicted from homology) Competence regulation

Genomic Context

Location: 1739856..1751220

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QBJ73_RS08275 (QBJ73_08280)	lptG	1740916..1741986 (+)	1071	WP_010325692.1	LPS export ABC transporter permease LptG	-
QBJ73_RS08280 (QBJ73_08285)	gpmI	1742110..1743657 (+)	1548	WP_010325693.1	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	-
QBJ73_RS08285 (QBJ73_08290)	-	1743676..1744851 (+)	1176	WP_010325694.1	S41 family peptidase	-
QBJ73_RS08290 (QBJ73_08295)	pilR	1744856..1746220 (-)	1365	WP_308469656.1	sigma-54 dependent transcriptional regulator	Regulator
QBJ73_RS08295 (QBJ73_08300)	pilS	1746293..1747861 (-)	1569	WP_010325696.1	PAS domain-containing sensor histidine kinase	Regulator
QBJ73_RS08300 (QBJ73_08305)	-	1747883..1748518 (-)	636	WP_010325697.1	response regulator	-
QBJ73_RS08305 (QBJ73_08310)	-	1748734..1749789 (+)	1056	WP_010325698.1	serine hydrolase	-
QBJ73_RS08310 (QBJ73_08315)	thrC	1749875..1751014 (-)	1140	WP_010325699.1	threonine synthase	-

Sequence

Protein

• Length: 454 a.a.
• Molecular weight: 51129.87 Da
• Isoelectric Point: 6.9738

>NTDB_id=814168 QBJ73_RS08290 WP_308469656.1 1744856..1746220(-) (pilR) [Acinetobacter johnsonii strain AYTCM]
MQMSLSRMGIDTRIAYRLQEAVQALKTHQYDACLTDLNLPDGNGLTLVDFIAQNYPNLPVAVLTAYGNMDIAIAALKAGA
FDFVSKPINQKHLEQLLQKAFNQPISHLHIQEDTLEHRLLIGQSLPIQQLRITLKKIARSQAPVFITGESGTGKEVVANL
VHRLSNRNEGPFIAINCGAIPTELMESELFGHRKGSFTGATQDKQGLILSAYGGSLFLDEIAELPLTMQVKLLRAVQEKR
IRPIGSDTEIDVDFRVISASHQDLEALVQQGKFRQDLYFRIHVMDIVLPALRERGNDIILLAQHFIQKICQEWDIPVKPL
SERAREFLLAQYYPGNVRELRNMMERAITLSDESSIDLPHLQTAPLRPIAQTNYANATQQGTIGNDQLSHVPSRKLPEEG
LELYLEKIEKEILMNALNLTHWNRTLAAKKLGMSFRSLRYRLKKFGLDGEDDSV

Nucleotide

• Length: 1365 bp

>NTDB_id=814168 QBJ73_RS08290 WP_308469656.1 1744856..1746220(-) (pilR) [Acinetobacter johnsonii strain AYTCM]
ATGCAAATGTCTTTAAGTCGGATGGGGATTGATACACGTATTGCCTATCGCTTACAGGAGGCTGTTCAAGCACTTAAAAC
ACATCAATATGATGCCTGTCTGACAGATTTGAATTTACCTGATGGTAATGGATTAACGCTGGTGGATTTTATTGCTCAAA
ATTATCCTAATCTACCTGTAGCTGTATTAACTGCTTATGGCAACATGGATATTGCGATTGCAGCACTTAAAGCTGGTGCT
TTTGATTTTGTCAGTAAACCGATCAACCAAAAACATTTAGAGCAACTTTTACAAAAAGCCTTTAATCAGCCCATCAGTCA
TCTGCATATCCAAGAAGATACGCTTGAACATCGTCTGCTGATTGGTCAGTCCCTTCCTATTCAACAGCTACGTATCACCT
TAAAGAAAATTGCACGCTCGCAAGCCCCTGTCTTTATTACGGGTGAATCAGGCACTGGCAAAGAAGTGGTGGCTAATCTG
GTACATCGCCTGAGCAATCGCAATGAAGGGCCATTTATTGCCATTAACTGCGGTGCCATACCGACCGAACTGATGGAAAG
TGAATTGTTTGGACACCGTAAAGGCAGCTTCACAGGGGCCACTCAAGACAAACAAGGGCTGATTCTCTCTGCATATGGCG
GCAGTTTATTTTTAGATGAAATTGCCGAGTTACCGCTCACTATGCAGGTGAAACTGCTGCGCGCGGTACAAGAAAAACGC
ATTCGCCCAATTGGGAGTGACACGGAAATTGATGTCGATTTTCGTGTGATTAGTGCCAGCCATCAAGACCTAGAAGCACT
GGTACAACAAGGCAAGTTCCGTCAGGATTTGTACTTCCGCATCCATGTCATGGACATTGTGCTGCCTGCCCTACGTGAGC
GTGGCAATGACATTATTCTTTTAGCACAACATTTCATTCAGAAAATCTGCCAAGAATGGGACATCCCAGTCAAACCACTG
AGTGAACGTGCACGTGAGTTTTTATTGGCCCAATATTATCCAGGCAATGTGCGTGAACTACGCAATATGATGGAACGTGC
CATCACTTTAAGTGATGAAAGCAGTATCGACTTACCACACTTGCAAACAGCACCACTGCGACCGATTGCTCAGACCAACT
ATGCCAATGCCACCCAACAAGGTACTATTGGCAATGATCAACTTAGCCATGTGCCTTCGCGTAAATTGCCCGAAGAGGGT
TTAGAGCTGTATTTAGAAAAAATTGAAAAAGAAATTTTGATGAATGCGCTCAATCTCACCCACTGGAACCGAACACTAGC
GGCTAAAAAGCTCGGCATGTCTTTCCGTTCTTTACGTTATCGCTTGAAGAAATTCGGGCTAGATGGCGAAGACGATTCCG
TTTAG

Domains

Predicted by InterproScan.

• Sigma-54 interaction domain (Sigma54_activat) (120-286)

• Response regulator receiver domain (Response_reg) (4-97)

• Bacterial regulatory protein, Fis family (HTH_8) (405-445)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Acinetobacter baumannii strain A118	74.229	100	0.742
pilR	Pseudomonas aeruginosa PAK	49.446	99.339	0.491