Detailed information NTG0081407

Bioinformatically predicted

Overview

• Name: comR
• Type: Regulator
• Locus tag: R8474_RS09245
• Genome accession: NZ_AP026914
• Coordinates: 1824023..1824922 (-)
• Length: 299 a.a.
• NCBI ID: WP_081573897.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain PZ900700003
• Function: activate transcription of comX (predicted from homology) Competence regulation

Genomic Context

Location: 1819023..1829922

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R8474_RS09220 (PC0003_18140)	rsmA	1819353..1820225 (-)	873	WP_001216877.1	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	-
R8474_RS09225 (PC0003_18150)	-	1820356..1820664 (-)	309	WP_000333257.1	hypothetical protein	-
R8474_RS09230 (PC0003_18160)	-	1820657..1821298 (-)	642	WP_000565531.1	ABC transporter ATP-binding protein	-
R8474_RS09235 (PC0003_18170)	-	1821300..1823330 (-)	2031	WP_050260097.1	bacteriocin-associated integral membrane family protein	-
R8474_RS09240 (PC0003_18180)	-	1823407..1823703 (-)	297	WP_000815394.1	lactococcin 972 family bacteriocin	-
R8474_RS09245 (PC0003_18190)	comR	1824023..1824922 (-)	900	WP_081573897.1	helix-turn-helix transcriptional regulator	Regulator
R8474_RS09250 (PC0003_18200)	rnmV	1824994..1825554 (-)	561	WP_000660009.1	ribonuclease M5	-
R8474_RS09255 (PC0003_18210)	-	1825554..1826327 (-)	774	WP_000575634.1	TatD family hydrolase	-
R8474_RS09260 (PC0003_18220)	-	1826632..1827351 (-)	720	Protein_1816	DUF1542 domain-containing protein	-
R8474_RS09265 (PC0003_18230)	rpmH	1827560..1827694 (-)	135	WP_000831905.1	50S ribosomal protein L34	-
R8474_RS09270 (PC0003_18240)	-	1827839..1829053 (-)	1215	WP_000666469.1	pyridoxal phosphate-dependent aminotransferase	-
R8474_RS09275 (PC0003_18250)	-	1829209..1829502 (-)	294	WP_000977368.1	hypothetical protein	-

Sequence

Protein

• Length: 299 a.a.
• Molecular weight: 35379.13 Da
• Isoelectric Point: 4.7732

>NTDB_id=81407 R8474_RS09245 WP_081573897.1 1824023..1824922(-) (comR) [Streptococcus pneumoniae strain PZ900700003]
MLIGQKIKEIRIEKGVSRPDFCGDEQELTVRQLSRIESGASQPSLPKLDYIARRLGVPVYSLMPDFSALPSAYLELKYQI
LREPIYGKEEEYDKKEACLEEIYKTYFDNLPKEEQLACEVLQACLDTSRTRRPEYAELILEEHMPQIIEKEAYSINDMLL
IRLFFYQMLIRKDLAKFINQIEKLMLFLLEQKKVTKLENFFIIRDTLISGMCCLEKVGVTDCFNDYLSCLQEIMDKTQDY
QKKPLVFMFLWKQALREERDFSLAESFYQSSKTFAQLIGDEFLVKKLTEEWQEDVKKYL

Nucleotide

• Length: 900 bp

>NTDB_id=81407 R8474_RS09245 WP_081573897.1 1824023..1824922(-) (comR) [Streptococcus pneumoniae strain PZ900700003]
ATGTTAATTGGTCAAAAAATTAAAGAGATTCGGATAGAAAAAGGAGTTAGTCGTCCAGATTTTTGTGGAGATGAGCAAGA
ACTGACAGTTCGTCAACTGTCGCGAATTGAAAGTGGAGCTTCGCAACCGAGTTTGCCCAAGTTAGACTATATTGCTCGCC
GGCTAGGAGTTCCAGTTTATAGCCTTATGCCGGATTTTTCAGCTCTTCCTTCTGCTTATTTAGAATTGAAATACCAGATT
TTACGTGAACCAATCTATGGTAAAGAAGAGGAGTACGATAAGAAGGAAGCGTGTTTGGAAGAGATTTATAAAACATACTT
TGATAATCTTCCTAAAGAAGAACAATTAGCATGTGAAGTATTGCAGGCGTGTTTGGATACTTCTAGAACTAGAAGGCCTG
AATATGCAGAGTTAATACTTGAGGAACATATGCCTCAGATTATAGAAAAAGAAGCTTATTCAATAAATGATATGTTGTTG
ATTCGTTTGTTTTTTTATCAAATGCTCATTAGAAAAGATCTTGCCAAATTTATAAATCAAATCGAAAAGCTAATGCTCTT
TCTTTTGGAACAGAAAAAGGTAACTAAATTAGAAAACTTCTTTATAATTAGAGATACTCTTATTTCAGGAATGTGTTGTC
TTGAAAAGGTAGGAGTAACTGATTGTTTTAATGATTATCTATCGTGTTTACAAGAAATTATGGATAAAACTCAAGATTAT
CAAAAGAAACCTCTTGTATTTATGTTTTTGTGGAAGCAAGCATTAAGAGAAGAAAGAGATTTTAGTTTAGCTGAATCATT
TTATCAGTCTTCTAAAACATTTGCGCAGCTAATTGGAGATGAATTTCTAGTAAAGAAATTGACAGAGGAATGGCAAGAGG
ATGTCAAAAAATATTTATAA

Domains

Predicted by InterProScan.

• ComR tetratricopeptide (ComR_TPR) (70-291)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR	Streptococcus mutans UA159	38.095	98.328	0.375
comR	Streptococcus suis P1/7	37.457	97.324	0.365
comR	Streptococcus suis 05ZYH33	37.457	97.324	0.365
comR	Streptococcus pyogenes MGAS8232	36.242	99.666	0.361