Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA   Type   Machinery gene
Locus tag   MTS72_RS01925 Genome accession   NZ_CP121595
Coordinates   412913..413323 (+) Length   136 a.a.
NCBI ID   WP_001978433.1    Uniprot ID   A0A0E1JQ57
Organism   Acinetobacter baumannii strain MAB17     
Function   dsDNA binding (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 407913..418323
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MTS72_RS01910 (MTS72_01910) - 408902..411208 (+) 2307 WP_000259109.1 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase -
  MTS72_RS01915 (MTS72_01915) - 411253..412026 (-) 774 WP_029423654.1 SDR family oxidoreductase -
  MTS72_RS01920 (MTS72_01920) mazG 412138..412944 (+) 807 WP_000359488.1 nucleoside triphosphate pyrophosphohydrolase -
  MTS72_RS01925 (MTS72_01925) comEA 412913..413323 (+) 411 WP_001978433.1 ComEA family DNA-binding protein Machinery gene
  MTS72_RS01930 (MTS72_01930) pcnB 413448..414911 (+) 1464 WP_001194201.1 polynucleotide adenylyltransferase PcnB -
  MTS72_RS01935 (MTS72_01935) folK 414908..415390 (+) 483 WP_000219215.1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase -
  MTS72_RS01940 (MTS72_01940) panB 415436..416245 (+) 810 WP_000624763.1 3-methyl-2-oxobutanoate hydroxymethyltransferase -
  MTS72_RS01945 (MTS72_01945) panC 416249..417097 (+) 849 WP_000846362.1 pantoate--beta-alanine ligase -
  MTS72_RS01950 (MTS72_01950) rapZ 417120..417971 (+) 852 WP_000821671.1 RNase adapter RapZ -
  MTS72_RS01955 (MTS72_01955) - 417968..418237 (+) 270 WP_000567533.1 HPr family phosphocarrier protein -

Sequence

Protein


Download         Length: 136 a.a.        Molecular weight: 15687.00 Da        Isoelectric Point: 10.4475

>NTDB_id=813319 MTS72_RS01925 WP_001978433.1 412913..413323(+) (comEA) [Acinetobacter baumannii strain MAB17]
MQYSMRFWKNKYFLLIMLCLGVISPSVYAQSFDKNFQEWKAKQQMYDQKLNISKSSHSNGSKISQTKNFNDSTGQIHLNQ
ANVNEFQQLKGIGEKKAQAIVEYRQKNGSFKNIDEIKNVKGIGPAIFEKNKSRLAL

Nucleotide


Download         Length: 411 bp        

>NTDB_id=813319 MTS72_RS01925 WP_001978433.1 412913..413323(+) (comEA) [Acinetobacter baumannii strain MAB17]
ATGCAATACAGCATGAGATTTTGGAAAAATAAGTATTTTCTTTTAATAATGTTGTGCTTGGGGGTAATTTCACCTTCGGT
TTACGCTCAATCTTTTGACAAAAACTTTCAAGAGTGGAAGGCTAAACAGCAGATGTATGACCAAAAGTTAAACATCTCTA
AGTCTTCTCATTCTAATGGTTCTAAAATTTCTCAAACTAAAAATTTTAATGACTCTACAGGGCAAATTCATTTGAATCAG
GCGAATGTAAATGAGTTTCAGCAGTTAAAAGGTATAGGTGAGAAAAAGGCTCAAGCGATTGTAGAATACAGACAAAAGAA
CGGTAGCTTTAAAAATATTGACGAAATTAAAAACGTTAAAGGAATTGGACCAGCCATTTTTGAAAAAAATAAATCACGTT
TAGCCTTATAA

Domains

Predicted by InterproScan.

Helix-hairpin-helix motif (HHH_3)

(74-134)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0E1JQ57

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Acinetobacter baumannii strain A118

97.059

100

0.971
  comEA Acinetobacter baumannii D1279779

96.324

100

0.963
  comEA Acinetobacter baylyi ADP1

42.748

96.324

0.412