Detailed information NTG0812697

Bioinformatically predicted

Overview

• Name: comGA
• Type: Machinery gene
• Locus tag: QA594_RS09905
• Genome accession: NZ_CP121518
• Coordinates: 2087013..2087987 (-)
• Length: 324 a.a.
• NCBI ID: WP_024051204.1
• Uniprot ID: -
• Organism: Staphylococcus epidermidis strain 6DSE07
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2082013..2092987

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QA594_RS09870	gcvT	2082531..2083622 (-)	1092	WP_099797720.1	glycine cleavage system aminomethyltransferase GcvT	-
QA594_RS09875	-	2083840..2084352 (-)	513	WP_002497929.1	shikimate kinase	-
QA594_RS09880	-	2084517..2085008 (-)	492	WP_002440043.1	competence type IV pilus minor pilin ComGF	-
QA594_RS09885	-	2084932..2085225 (-)	294	WP_099797718.1	hypothetical protein	-
QA594_RS09890	comGD	2085212..2085649 (-)	438	WP_001831025.1	competence type IV pilus minor pilin ComGD	-
QA594_RS09895	comGC	2085639..2085956 (-)	318	WP_001831271.1	competence type IV pilus major pilin ComGC	Machinery gene
QA594_RS09900	comGB	2085974..2087041 (-)	1068	WP_024051203.1	competence type IV pilus assembly protein ComGB	Machinery gene
QA594_RS09905	comGA	2087013..2087987 (-)	975	WP_024051204.1	competence type IV pilus ATPase ComGA	Machinery gene
QA594_RS09910	-	2088043..2088666 (-)	624	WP_002446535.1	MBL fold metallo-hydrolase	-
QA594_RS09915	-	2088666..2088992 (-)	327	WP_001831234.1	MTH1187 family thiamine-binding protein	-
QA594_RS09920	-	2088992..2089978 (-)	987	WP_001831113.1	ROK family glucokinase	-
QA594_RS09925	-	2089978..2090178 (-)	201	WP_001831138.1	YqgQ family protein	-
QA594_RS09930	-	2090162..2091622 (-)	1461	WP_001832757.1	rhomboid family intramembrane serine protease	-
QA594_RS09935	-	2091623..2092174 (-)	552	WP_001831001.1	5-formyltetrahydrofolate cyclo-ligase	-
QA594_RS09940	rpmG	2092357..2092506 (-)	150	WP_001830957.1	50S ribosomal protein L33	-

Sequence

Protein

• Length: 324 a.a.
• Molecular weight: 37329.45 Da
• Isoelectric Point: 8.9899

>NTDB_id=812697 QA594_RS09905 WP_024051204.1 2087013..2087987(-) (comGA) [Staphylococcus epidermidis strain 6DSE07]
MKILFEQIINHAIKQEASDIHFIPCEEHTIIKLRIKDELTIYDRLSFPIYKKLLIYMKFQSGLDVSTQHRAQSGRYSYKM
KHLYYLRISTLPLSLGNESCVIRIVPQYFQTTRESYEFKDFKHFMKKKQGLLLFSGPTGSGKSTLMYQMVLYAHQKLNLN
VISVEDPVEQILNGITQISVNEKAGINYESSFKAILRCNPDVILIGEIRDSTVAKYVIQASLSGHLVLSTMHANDCKGAL
LRLLEMGISVQELCQAINLISNQRLITTTTNYRQLVSELMFQSQINYFFEHNHSLPKNFTKLATHLNKMSKEGVICEEVV
DKYI

Nucleotide

• Length: 975 bp

>NTDB_id=812697 QA594_RS09905 WP_024051204.1 2087013..2087987(-) (comGA) [Staphylococcus epidermidis strain 6DSE07]
TTGAAAATTTTATTTGAACAGATTATCAATCATGCAATTAAGCAAGAAGCAAGTGACATACACTTTATACCATGTGAGGA
ACACACTATAATTAAGCTAAGAATTAAAGATGAGCTCACAATATATGATAGACTTTCATTTCCAATTTATAAAAAATTAC
TTATATACATGAAGTTTCAATCTGGCTTAGATGTATCAACACAGCATAGAGCACAAAGTGGTAGATATAGTTATAAGATG
AAGCATTTATATTATTTAAGAATCTCTACATTACCTTTATCATTAGGCAATGAAAGTTGTGTAATTCGTATAGTACCTCA
ATACTTCCAAACTACACGAGAATCATATGAATTTAAAGATTTTAAACACTTTATGAAAAAGAAACAAGGTCTACTTTTGT
TTAGTGGACCAACTGGCTCTGGCAAAAGTACTTTAATGTACCAAATGGTCCTTTATGCACATCAAAAATTGAATTTAAAT
GTAATATCAGTTGAAGATCCAGTTGAGCAAATACTTAATGGAATCACACAAATATCAGTCAATGAAAAGGCAGGTATAAA
TTATGAAAGCTCTTTCAAAGCCATTTTAAGGTGTAATCCAGATGTAATTTTAATTGGTGAAATCAGAGATTCTACCGTAG
CTAAATACGTGATTCAAGCCAGTTTAAGCGGGCATTTAGTTTTGTCGACAATGCACGCGAATGATTGCAAGGGAGCACTA
TTACGATTATTAGAAATGGGTATTTCTGTCCAAGAGTTGTGCCAGGCAATCAATTTAATTTCTAATCAAAGATTAATCAC
TACTACTACAAATTATCGTCAACTAGTATCGGAATTAATGTTTCAAAGCCAAATAAATTATTTTTTTGAACATAATCATT
CTTTACCTAAAAATTTCACAAAATTAGCTACACATTTAAACAAAATGTCTAAAGAAGGTGTTATATGTGAAGAAGTTGTC
GATAAATACATTTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (7-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGA	Staphylococcus aureus MW2	69.753	100	0.698
comGA	Staphylococcus aureus N315	69.753	100	0.698