Detailed information NTG0812591

Bioinformatically predicted

Overview

• Name: comGA
• Type: Machinery gene
• Locus tag: QA588_RS07220
• Genome accession: NZ_CP121507
• Coordinates: 1519556..1520530 (+)
• Length: 324 a.a.
• NCBI ID: WP_001831109.1
• Uniprot ID: A0A9Q5JKD6
• Organism: Staphylococcus epidermidis strain 23DSE01
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1514556..1525530

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QA588_RS07185	rpmG	1515036..1515185 (+)	150	WP_001830957.1	50S ribosomal protein L33	-
QA588_RS07190	-	1515368..1515919 (+)	552	WP_001831001.1	5-formyltetrahydrofolate cyclo-ligase	-
QA588_RS07195	-	1515920..1517380 (+)	1461	WP_001832757.1	rhomboid family intramembrane serine protease	-
QA588_RS07200	-	1517364..1517564 (+)	201	WP_001831138.1	YqgQ family protein	-
QA588_RS07205	-	1517564..1518550 (+)	987	WP_001831113.1	ROK family glucokinase	-
QA588_RS07210	-	1518550..1518876 (+)	327	WP_001831234.1	MTH1187 family thiamine-binding protein	-
QA588_RS07215	-	1518876..1519499 (+)	624	WP_001831016.1	MBL fold metallo-hydrolase	-
QA588_RS07220	comGA	1519556..1520530 (+)	975	WP_001831109.1	competence type IV pilus ATPase ComGA	Machinery gene
QA588_RS07225	comGB	1520502..1521569 (+)	1068	WP_001831131.1	competence type IV pilus assembly protein ComGB	Machinery gene
QA588_RS07230	comGC	1521587..1521904 (+)	318	WP_001831271.1	competence type IV pilus major pilin ComGC	Machinery gene
QA588_RS07235	comGD	1521894..1522331 (+)	438	WP_001831025.1	competence type IV pilus minor pilin ComGD	-
QA588_RS07240	-	1522318..1522611 (+)	294	WP_001831116.1	hypothetical protein	-
QA588_RS07245	-	1522535..1523026 (+)	492	WP_002505402.1	competence type IV pilus minor pilin ComGF	-
QA588_RS07250	-	1523191..1523703 (+)	513	WP_002440040.1	shikimate kinase	-
QA588_RS07255	gcvT	1523921..1525012 (+)	1092	WP_001831107.1	glycine cleavage system aminomethyltransferase GcvT	-

Sequence

Protein

• Length: 324 a.a.
• Molecular weight: 37330.44 Da
• Isoelectric Point: 8.8174

>NTDB_id=812591 QA588_RS07220 WP_001831109.1 1519556..1520530(+) (comGA) [Staphylococcus epidermidis strain 23DSE01]
MKILFEQIINHAIKQEASDIHFIPCEEHTIIKLRIKDELTIYDRLSFPIYKKLLIYMKFQSGLDVSTQHRAQSGRYSYKM
KHLYYLRISTLPLSLGNESCVIRIVPQYFQTTRESYEFKDFKHFMKKKQGLLLFSGPTGSGKSTLMYQMVLYAHQKLNLN
VISVEDPVEQILNGITQISVNEKAGINYESSFKAILRCDPDVILIGEIRDSTVAKYVIQASLSGHLVLSTMHANDCKGAL
LRLLEMGISVQELCQAINLISNQRLITTTTNYRQLVSELMFQSQINYFFEHNHSLPKNFTKLATHLNKMSKEGVICEEVV
DKYI

Nucleotide

• Length: 975 bp

>NTDB_id=812591 QA588_RS07220 WP_001831109.1 1519556..1520530(+) (comGA) [Staphylococcus epidermidis strain 23DSE01]
TTGAAAATTTTATTTGAACAGATTATCAATCATGCAATTAAGCAAGAAGCAAGTGACATACACTTTATACCATGTGAGGA
ACACACTATAATTAAGCTAAGAATTAAAGATGAGCTCACAATATATGATAGACTTTCATTTCCAATTTATAAAAAATTAC
TTATATACATGAAGTTTCAATCTGGCTTAGATGTATCAACACAGCATAGAGCACAAAGTGGTAGATATAGTTATAAGATG
AAGCATTTATATTATTTAAGAATCTCTACATTACCTTTATCATTAGGCAATGAAAGTTGTGTAATTCGTATAGTACCTCA
ATACTTCCAAACTACACGAGAATCATATGAATTTAAAGATTTTAAACACTTTATGAAAAAGAAACAAGGTCTACTTTTGT
TTAGTGGACCAACTGGCTCTGGCAAAAGTACTTTAATGTACCAAATGGTCCTTTATGCACATCAAAAATTGAATTTAAAT
GTAATATCAGTTGAAGATCCAGTTGAGCAAATACTTAATGGAATCACACAAATATCAGTCAATGAAAAGGCAGGTATAAA
TTATGAAAGCTCTTTCAAAGCCATTTTAAGGTGTGATCCAGATGTAATTTTAATTGGTGAAATCAGAGATTCTACCGTAG
CTAAATACGTGATTCAAGCCAGTTTAAGCGGGCATTTAGTTTTGTCGACAATGCACGCGAATGATTGCAAGGGAGCACTA
TTACGATTATTAGAAATGGGTATTTCTGTCCAAGAGTTGTGCCAGGCAATCAATTTAATTTCTAATCAAAGATTAATCAC
TACTACTACAAATTATCGTCAACTAGTATCGGAATTAATGTTTCAAAGCCAAATAAATTATTTTTTTGAACATAATCATT
CTTTACCTAAAAATTTCACAAAATTAGCTACACATTTAAACAAAATGTCTAAAGAAGGTGTTATATGTGAAGAAGTTGTC
GATAAATACATTTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (7-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGA	Staphylococcus aureus MW2	70.062	100	0.701
comGA	Staphylococcus aureus N315	70.062	100	0.701