Detailed information    

insolico Bioinformatically predicted

Overview

Name   comM   Type   Regulator
Locus tag   P8P68_RS08430 Genome accession   NZ_CP121467
Coordinates   1724726..1725349 (+) Length   207 a.a.
NCBI ID   WP_049520827.1    Uniprot ID   A0A1X1H7Y0
Organism   Streptococcus sp. D7B5     
Function   fratricide immunity (predicted from homology)   
Competence regulation

Genomic Context

Location: 1719726..1730349
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P8P68_RS08420 (P8P68_08420) rpoC 1720396..1724061 (+) 3666 WP_278275867.1 DNA-directed RNA polymerase subunit beta' -
  P8P68_RS08425 (P8P68_08425) ndk 1724172..1724591 (+) 420 WP_000438308.1 nucleoside-diphosphate kinase -
  P8P68_RS08430 (P8P68_08430) comM 1724726..1725349 (+) 624 WP_049520827.1 hypothetical protein Regulator
  P8P68_RS08435 (P8P68_08435) tsaE 1725433..1725876 (+) 444 WP_000556959.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  P8P68_RS08440 (P8P68_08440) - 1725866..1726387 (+) 522 WP_000455514.1 GNAT family N-acetyltransferase -
  P8P68_RS08445 (P8P68_08445) - 1726392..1727432 (+) 1041 WP_000592171.1 LCP family protein -
  P8P68_RS08450 (P8P68_08450) cinA 1727505..1728761 (+) 1257 WP_000642673.1 competence/damage-inducible protein A Machinery gene
  P8P68_RS08455 (P8P68_08455) recA 1728816..1729967 (+) 1152 WP_001085520.1 recombinase RecA Machinery gene
  P8P68_RS08460 (P8P68_08460) - 1730097..1730291 (+) 195 WP_000415527.1 PspC domain-containing protein -

Sequence

Protein


Download         Length: 207 a.a.        Molecular weight: 23622.61 Da        Isoelectric Point: 9.5058

>NTDB_id=812255 P8P68_RS08430 WP_049520827.1 1724726..1725349(+) (comM) [Streptococcus sp. D7B5]
MVKSIRLLLLIAVIQISFSSCLLWKESFLSLKQTNAYFLILIVGISVLCAGINYFHTADQSRHSILHVQKKVSLVYCLLL
VVNLLATCLVLSESIQTTSKLQQELVDLFLPSFFFLLGVDLLIFLPFDKIFRAIENHLNKKKTVVISVLATIVFLRNPIV
ISSILLYISVGFLCARFLFPKCIQREISFYGHLIRDILFVFSIVVFF

Nucleotide


Download         Length: 624 bp        

>NTDB_id=812255 P8P68_RS08430 WP_049520827.1 1724726..1725349(+) (comM) [Streptococcus sp. D7B5]
ATGGTAAAATCAATTCGCCTATTGTTACTGATTGCAGTCATCCAGATTAGTTTTAGTAGTTGCCTATTATGGAAAGAATC
CTTTTTATCTTTAAAACAGACCAATGCTTACTTTTTGATTTTGATAGTAGGAATTTCTGTTTTGTGCGCTGGGATAAATT
ATTTCCATACAGCAGACCAGTCTAGACATAGTATTTTACATGTTCAAAAGAAAGTGAGCCTTGTTTATTGCCTCCTTTTA
GTAGTCAATCTTCTGGCAACCTGTCTGGTTCTCTCAGAAAGCATCCAAACCACTAGCAAATTGCAGCAGGAACTGGTTGA
CCTCTTTTTACCCTCCTTCTTTTTCTTGCTAGGAGTAGATCTATTGATTTTCTTACCTTTTGATAAAATTTTTCGCGCTA
TAGAAAATCACCTAAATAAAAAGAAAACAGTCGTCATTTCCGTTCTAGCTACGATAGTTTTCTTGAGGAACCCCATAGTG
ATTTCCTCGATTCTTCTTTATATCAGTGTTGGTTTTCTATGCGCACGTTTCCTTTTTCCCAAATGTATTCAAAGGGAAAT
CTCCTTTTATGGGCACCTGATTCGGGATATCCTGTTTGTTTTTTCAATAGTTGTATTCTTTTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1X1H7Y0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comM Streptococcus pneumoniae D39

50.971

99.517

0.507
  comM Streptococcus pneumoniae R6

50.971

99.517

0.507
  comM Streptococcus pneumoniae TIGR4

50.971

99.517

0.507
  comM Streptococcus mitis NCTC 12261

40.609

95.169

0.386
  comM Streptococcus mitis SK321

40.609

95.169

0.386