Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | P8P68_RS06230 | Genome accession | NZ_CP121467 |
| Coordinates | 1286800..1287753 (-) | Length | 317 a.a. |
| NCBI ID | WP_278275775.1 | Uniprot ID | A0AAX3THP0 |
| Organism | Streptococcus sp. D7B5 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1281800..1292753
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| P8P68_RS06205 (P8P68_06205) | - | 1282556..1283179 (-) | 624 | WP_049478137.1 | hypothetical protein | - |
| P8P68_RS06210 (P8P68_06210) | jag | 1283235..1284221 (-) | 987 | WP_049478136.1 | RNA-binding cell elongation regulator Jag/EloR | - |
| P8P68_RS06215 (P8P68_06215) | - | 1284236..1285063 (-) | 828 | WP_162837252.1 | membrane protein insertase YidC | - |
| P8P68_RS06220 (P8P68_06220) | rnpA | 1285038..1285409 (-) | 372 | WP_084879949.1 | ribonuclease P protein component | - |
| P8P68_RS06225 (P8P68_06225) | - | 1285559..1286749 (-) | 1191 | WP_278275774.1 | acetate kinase | - |
| P8P68_RS06230 (P8P68_06230) | comYH | 1286800..1287753 (-) | 954 | WP_278275775.1 | class I SAM-dependent methyltransferase | Machinery gene |
| P8P68_RS06235 (P8P68_06235) | - | 1288024..1288611 (+) | 588 | WP_084851076.1 | Ltp family lipoprotein | - |
| P8P68_RS06240 (P8P68_06240) | - | 1288685..1289996 (+) | 1312 | Protein_1197 | IS3 family transposase | - |
| P8P68_RS06245 (P8P68_06245) | - | 1289990..1290616 (-) | 627 | WP_278275776.1 | class I SAM-dependent methyltransferase | - |
| P8P68_RS06250 (P8P68_06250) | comGG/cglG | 1290649..1291062 (-) | 414 | WP_049490203.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| P8P68_RS06255 (P8P68_06255) | comGF/cglF | 1291040..1291501 (-) | 462 | WP_049490202.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| P8P68_RS06260 (P8P68_06260) | comGE/cglE | 1291464..1291766 (-) | 303 | WP_000413367.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| P8P68_RS06265 (P8P68_06265) | comGD/cglD | 1291729..1292163 (-) | 435 | WP_049519116.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| P8P68_RS06270 (P8P68_06270) | comGC/cglC | 1292126..1292449 (-) | 324 | WP_000735798.1 | competence type IV pilus major pilin ComGC | Machinery gene |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 35581.60 Da Isoelectric Point: 4.2272
>NTDB_id=812230 P8P68_RS06230 WP_278275775.1 1286800..1287753(-) (comYH) [Streptococcus sp. D7B5]
MDFEKIEQAYTYLLENVQIIQSDLATNFYDALVEQNSIYLDGETEQKQVKENNQALKRLALRKEEWLKTYQFLLMKAGQT
EPLQANHQFTPDAIALLLVLVVEELFEQEEISILEIGSGMGILGATFLTSLAKKVDYLGIEVDDLLIDLAASMSDVIGLQ
AGFVQGDAVRPQMLKESDVVISDLPVGYYPDDAIASRYQVASSQEHTYAHHLLMEQGLKYLKSNGYAIFLAPSDLLTSPQ
SDLLKGWLKDEVSLAAIIALPEDIFSTASQAKSIFVLQKKRDKEIEPFVYPLTSLQDPSVLLTFKENFQNWSKGTEI
MDFEKIEQAYTYLLENVQIIQSDLATNFYDALVEQNSIYLDGETEQKQVKENNQALKRLALRKEEWLKTYQFLLMKAGQT
EPLQANHQFTPDAIALLLVLVVEELFEQEEISILEIGSGMGILGATFLTSLAKKVDYLGIEVDDLLIDLAASMSDVIGLQ
AGFVQGDAVRPQMLKESDVVISDLPVGYYPDDAIASRYQVASSQEHTYAHHLLMEQGLKYLKSNGYAIFLAPSDLLTSPQ
SDLLKGWLKDEVSLAAIIALPEDIFSTASQAKSIFVLQKKRDKEIEPFVYPLTSLQDPSVLLTFKENFQNWSKGTEI
Nucleotide
Download Length: 954 bp
>NTDB_id=812230 P8P68_RS06230 WP_278275775.1 1286800..1287753(-) (comYH) [Streptococcus sp. D7B5]
ATGGATTTTGAAAAAATAGAACAAGCTTATACGTATTTACTAGAGAATGTCCAAATCATCCAAAGTGATTTGGCGACTAA
CTTTTATGATGCCTTGGTAGAGCAAAACAGCATTTATCTAGATGGCGAGACTGAGCAAAAGCAGGTCAAGGAGAACAATC
AAGCCCTTAAGCGCTTAGCACTTCGCAAGGAAGAGTGGCTCAAGACCTACCAGTTTCTCTTGATGAAGGCAGGACAAACG
GAGCCTTTACAGGCCAATCACCAGTTTACACCAGATGCCATTGCCCTCCTCTTGGTACTTGTTGTAGAAGAGTTGTTTGA
ACAAGAGGAAATTAGCATCCTCGAAATAGGTTCTGGTATGGGGATTTTGGGGGCTACTTTCTTGACTTCTCTTGCTAAAA
AAGTAGATTACTTGGGAATTGAAGTGGATGACTTGCTGATTGATTTGGCAGCAAGTATGTCAGATGTGATTGGTTTACAG
GCTGGTTTTGTTCAAGGAGATGCCGTTCGTCCGCAAATGCTTAAAGAAAGCGACGTGGTCATCAGCGACTTGCCTGTAGG
CTATTACCCAGACGATGCCATCGCTTCTCGCTATCAAGTGGCTTCTAGTCAAGAGCATACCTATGCCCACCATTTGCTGA
TGGAACAAGGCCTCAAGTACCTTAAGTCAAATGGCTATGCTATTTTTCTAGCTCCGAGTGATTTATTGACCAGCCCTCAA
AGTGACTTATTAAAAGGGTGGCTCAAAGACGAAGTGAGTCTGGCTGCTATCATCGCTCTGCCAGAGGATATTTTCTCAAC
TGCAAGCCAAGCTAAAAGTATTTTTGTCTTACAGAAGAAAAGAGACAAGGAAATAGAACCCTTTGTCTACCCTCTTACTA
GCTTGCAAGATCCGTCAGTTTTGTTGACCTTTAAAGAAAATTTTCAAAATTGGAGCAAAGGTACTGAAATATAA
ATGGATTTTGAAAAAATAGAACAAGCTTATACGTATTTACTAGAGAATGTCCAAATCATCCAAAGTGATTTGGCGACTAA
CTTTTATGATGCCTTGGTAGAGCAAAACAGCATTTATCTAGATGGCGAGACTGAGCAAAAGCAGGTCAAGGAGAACAATC
AAGCCCTTAAGCGCTTAGCACTTCGCAAGGAAGAGTGGCTCAAGACCTACCAGTTTCTCTTGATGAAGGCAGGACAAACG
GAGCCTTTACAGGCCAATCACCAGTTTACACCAGATGCCATTGCCCTCCTCTTGGTACTTGTTGTAGAAGAGTTGTTTGA
ACAAGAGGAAATTAGCATCCTCGAAATAGGTTCTGGTATGGGGATTTTGGGGGCTACTTTCTTGACTTCTCTTGCTAAAA
AAGTAGATTACTTGGGAATTGAAGTGGATGACTTGCTGATTGATTTGGCAGCAAGTATGTCAGATGTGATTGGTTTACAG
GCTGGTTTTGTTCAAGGAGATGCCGTTCGTCCGCAAATGCTTAAAGAAAGCGACGTGGTCATCAGCGACTTGCCTGTAGG
CTATTACCCAGACGATGCCATCGCTTCTCGCTATCAAGTGGCTTCTAGTCAAGAGCATACCTATGCCCACCATTTGCTGA
TGGAACAAGGCCTCAAGTACCTTAAGTCAAATGGCTATGCTATTTTTCTAGCTCCGAGTGATTTATTGACCAGCCCTCAA
AGTGACTTATTAAAAGGGTGGCTCAAAGACGAAGTGAGTCTGGCTGCTATCATCGCTCTGCCAGAGGATATTTTCTCAAC
TGCAAGCCAAGCTAAAAGTATTTTTGTCTTACAGAAGAAAAGAGACAAGGAAATAGAACCCTTTGTCTACCCTCTTACTA
GCTTGCAAGATCCGTCAGTTTTGTTGACCTTTAAAGAAAATTTTCAAAATTGGAGCAAAGGTACTGAAATATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA140 |
57.878 |
98.107 |
0.568 |
| comYH | Streptococcus mutans UA159 |
57.556 |
98.107 |
0.565 |