Detailed information    

insolico Bioinformatically predicted

Overview

Name   vraR   Type   Regulator
Locus tag   P8632_RS04665 Genome accession   NZ_CP121263
Coordinates   929397..930026 (+) Length   209 a.a.
NCBI ID   WP_002450048.1    Uniprot ID   A0A1L8Y4G9
Organism   Staphylococcus hominis strain FSEL1     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 924397..935026
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P8632_RS04640 (P8632_04630) map 925217..925969 (+) 753 WP_002455125.1 type I methionyl aminopeptidase -
  P8632_RS04645 (P8632_04635) - 926018..927028 (-) 1011 WP_064207051.1 HoxN/HupN/NixA family nickel/cobalt transporter -
  P8632_RS04650 (P8632_04640) - 927256..927642 (+) 387 WP_002450072.1 hypothetical protein -
  P8632_RS04655 (P8632_04645) liaF 927663..928364 (+) 702 WP_002450089.1 cell wall-active antibiotics response protein LiaF -
  P8632_RS04660 (P8632_04650) vraS 928361..929395 (+) 1035 WP_002450020.1 sensor histidine kinase Regulator
  P8632_RS04665 (P8632_04655) vraR 929397..930026 (+) 630 WP_002450048.1 two-component system response regulator VraR Regulator
  P8632_RS04670 (P8632_04660) - 930106..931314 (-) 1209 WP_002488060.1 YihY/virulence factor BrkB family protein -
  P8632_RS04675 (P8632_04665) - 931406..931687 (-) 282 WP_002488074.1 hypothetical protein -
  P8632_RS04680 (P8632_04670) - 931693..932157 (-) 465 WP_049335620.1 low molecular weight protein-tyrosine-phosphatase -
  P8632_RS04685 (P8632_04675) - 932299..932505 (+) 207 WP_064207085.1 DUF1128 domain-containing protein -
  P8632_RS04690 (P8632_04680) - 932517..933764 (+) 1248 WP_064207086.1 aminopeptidase -
  P8632_RS04695 (P8632_04685) - 933797..934330 (+) 534 WP_002488082.1 acyl-CoA thioesterase -

Sequence

Protein


Download         Length: 209 a.a.        Molecular weight: 23592.26 Da        Isoelectric Point: 5.3673

>NTDB_id=811453 P8632_RS04665 WP_002450048.1 929397..930026(+) (vraR) [Staphylococcus hominis strain FSEL1]
MTIKVLFVDDHEMVRIGISSYLSTQSDIEVVGEGSSGKEAIEKAHTLNPDLILMDLLMNDMDGVEATTQIKKDLPHIKVV
MLTSFIEDKEVYRALDAGVDSYILKTTSASDIAEAVRKTYRGESVFEPEVLVKMRNRMKKKAELYEMLTEREMEILLLIA
KGYSNQEIASASHITIKTVKTHVSNILSKLEVQDRTQAVIYAFQHNLIQ

Nucleotide


Download         Length: 630 bp        

>NTDB_id=811453 P8632_RS04665 WP_002450048.1 929397..930026(+) (vraR) [Staphylococcus hominis strain FSEL1]
ATGACGATTAAAGTATTATTTGTAGATGATCATGAAATGGTTAGAATTGGTATTTCAAGTTATTTATCTACTCAATCTGA
TATTGAAGTAGTAGGGGAAGGATCATCAGGAAAAGAGGCAATTGAAAAAGCACATACGTTAAATCCTGATTTAATTTTAA
TGGATTTGTTAATGAATGATATGGACGGTGTAGAAGCGACGACACAAATAAAAAAAGATTTGCCTCACATCAAAGTAGTC
ATGTTAACAAGTTTTATAGAAGATAAAGAAGTATATAGGGCACTTGATGCAGGGGTTGATAGTTATATATTAAAAACGAC
AAGCGCAAGTGATATTGCAGAAGCAGTTAGAAAAACATATCGTGGAGAATCTGTATTTGAGCCAGAAGTTTTAGTAAAAA
TGAGAAATAGAATGAAGAAGAAAGCAGAATTATATGAAATGCTCACTGAACGTGAAATGGAAATATTGTTATTAATTGCT
AAAGGCTATTCTAATCAAGAAATTGCCAGTGCTTCACATATTACAATTAAAACAGTAAAAACACATGTGAGTAATATTTT
AAGTAAACTAGAGGTACAAGATAGAACACAAGCGGTTATTTATGCATTCCAACATAATTTAATTCAATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(5-116)

Bacterial regulatory proteins, luxR family (GerE)

(147-202)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1L8Y4G9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraR Staphylococcus aureus N315

94.737

100

0.947
  degU Bacillus subtilis subsp. subtilis str. 168

35.268

100

0.378