Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   P8632_RS04660 Genome accession   NZ_CP121263
Coordinates   928361..929395 (+) Length   344 a.a.
NCBI ID   WP_002450020.1    Uniprot ID   -
Organism   Staphylococcus hominis strain FSEL1     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 923361..934395
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P8632_RS04635 (P8632_04625) - 924054..925043 (-) 990 WP_049438092.1 FUSC family protein -
  P8632_RS04640 (P8632_04630) map 925217..925969 (+) 753 WP_002455125.1 type I methionyl aminopeptidase -
  P8632_RS04645 (P8632_04635) - 926018..927028 (-) 1011 WP_064207051.1 HoxN/HupN/NixA family nickel/cobalt transporter -
  P8632_RS04650 (P8632_04640) - 927256..927642 (+) 387 WP_002450072.1 hypothetical protein -
  P8632_RS04655 (P8632_04645) liaF 927663..928364 (+) 702 WP_002450089.1 cell wall-active antibiotics response protein LiaF -
  P8632_RS04660 (P8632_04650) vraS 928361..929395 (+) 1035 WP_002450020.1 sensor histidine kinase Regulator
  P8632_RS04665 (P8632_04655) vraR 929397..930026 (+) 630 WP_002450048.1 two-component system response regulator VraR Regulator
  P8632_RS04670 (P8632_04660) - 930106..931314 (-) 1209 WP_002488060.1 YihY/virulence factor BrkB family protein -
  P8632_RS04675 (P8632_04665) - 931406..931687 (-) 282 WP_002488074.1 hypothetical protein -
  P8632_RS04680 (P8632_04670) - 931693..932157 (-) 465 WP_049335620.1 low molecular weight protein-tyrosine-phosphatase -
  P8632_RS04685 (P8632_04675) - 932299..932505 (+) 207 WP_064207085.1 DUF1128 domain-containing protein -
  P8632_RS04690 (P8632_04680) - 932517..933764 (+) 1248 WP_064207086.1 aminopeptidase -
  P8632_RS04695 (P8632_04685) - 933797..934330 (+) 534 WP_002488082.1 acyl-CoA thioesterase -

Sequence


Protein


Download         Length: 344 a.a.        Molecular weight: 39657.23 Da        Isoelectric Point: 6.3137

>NTDB_id=811452 P8632_RS04660 WP_002450020.1 928361..929395(+) (vraS) [Staphylococcus hominis strain FSEL1]
MNHYLRAIGSMLILVYSMLTAFLFIDKVFVNIIYFQGMFYTQIFGIPVFLFLNLVIILLCIIVGSVLAYKINQQNDWIKN
QIEHAIEGETVGINDKNIELYNETIDIYQMLVPLNQELQRLRIKTQNLTNENYNMNDIKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETELAPPLNQQIPVLEKMIQESQLEMRALLLHLRPLGLKDKSLGEGIKDLVIDLQKKVPMKVIYDI
QDFKVPKGIEDHLFRITQEAISNTLRHSNGTKVTVELFNHQDYLLLRIQDNGKGFNVDEKVEQSYGLKNMRERALEIGAT
FHIVSLPDSGTRIEVKAPLTKEEG

Nucleotide


Download         Length: 1035 bp        

>NTDB_id=811452 P8632_RS04660 WP_002450020.1 928361..929395(+) (vraS) [Staphylococcus hominis strain FSEL1]
ATGAATCACTATTTAAGAGCAATAGGATCCATGCTTATTTTAGTATATAGCATGCTAACTGCGTTTTTATTTATAGATAA
AGTTTTTGTAAATATTATATATTTTCAAGGAATGTTCTATACTCAAATATTTGGTATACCTGTGTTTCTATTTCTTAATT
TAGTGATTATTTTACTTTGTATTATCGTTGGCTCTGTATTAGCTTATAAAATAAATCAGCAAAATGATTGGATAAAGAAT
CAAATTGAACATGCCATTGAAGGTGAAACGGTAGGGATTAATGATAAAAACATAGAACTATATAATGAGACAATTGATAT
TTATCAAATGTTAGTGCCTTTAAATCAAGAATTACAGAGATTAAGAATTAAAACTCAAAATTTAACAAATGAAAACTATA
ATATGAATGACATTAAAGTTAAAAAAATCATAGAAGATGAGCGTCAGCGTTTAGCAAGGGAACTACACGATTCAGTAAGT
CAACAACTTTTCGCAGCAAGTATGATGCTATCAGCGATAAAAGAAACAGAACTAGCACCACCTCTTAATCAACAAATTCC
AGTACTTGAGAAAATGATACAAGAATCTCAATTAGAGATGCGAGCGCTATTACTACATTTGCGACCTTTAGGACTCAAAG
ATAAATCATTAGGGGAAGGTATTAAAGATTTAGTCATTGATTTACAAAAGAAAGTACCTATGAAAGTGATTTATGATATA
CAAGATTTTAAAGTTCCAAAAGGAATTGAAGATCATCTATTTCGAATTACACAAGAGGCAATTTCAAATACATTAAGACA
TTCTAATGGAACTAAAGTGACAGTAGAATTATTTAATCATCAAGATTATTTATTATTAAGAATTCAGGATAATGGTAAAG
GTTTTAACGTAGATGAAAAAGTAGAACAAAGTTATGGATTGAAAAATATGAGAGAACGTGCATTAGAAATAGGTGCAACG
TTTCATATCGTATCTTTACCAGATTCAGGAACTAGAATAGAGGTAAAAGCACCTTTAACGAAAGAGGAGGGTTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

89.826

100

0.898