NTDB

Overview

Name	recG	Type	Machinery gene
Locus tag	RQ453_RS11770	Genome accession	NZ_CP135173
Coordinates	2511677..2513752 (-)	Length	691 a.a.
NCBI ID	WP_003096624.1	Uniprot ID	A0A0H2ZJ60
Organism	Pseudomonas aeruginosa strain CP-1
Function	homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2506677..2518752

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RQ453_RS11735 (RQ453_11735)	-	2506845..2507246 (+)	402	WP_003096637.1	heme-binding protein	-
RQ453_RS11740 (RQ453_11740)	-	2507380..2507547 (+)	168	WP_003098330.1	rubredoxin	-
RQ453_RS11745 (RQ453_11745)	-	2507731..2507898 (+)	168	WP_003098329.1	rubredoxin	-
RQ453_RS11750 (RQ453_11750)	alkT	2507950..2509104 (+)	1155	WP_003098326.1	rubredoxin-NAD(+) reductase AlkT	-
RQ453_RS11755 (RQ453_11755)	-	2509306..2509578 (+)	273	WP_003096630.1	HU family DNA-binding protein	-
RQ453_RS11760 (RQ453_11760)	-	2509714..2510106 (+)	393	WP_033996191.1	hypothetical protein	-
RQ453_RS11765 (RQ453_11765)	-	2510178..2511587 (-)	1410	WP_003136268.1	aminoacyl-tRNA deacylase and HDOD domain-containing protein	-
RQ453_RS11770 (RQ453_11770)	recG	2511677..2513752 (-)	2076	WP_003096624.1	ATP-dependent DNA helicase RecG	Machinery gene
RQ453_RS11775 (RQ453_11775)	oxyR	2513749..2514681 (-)	933	WP_003096622.1	oxidative stress transcriptional regulator OxyR	-
RQ453_RS11780 (RQ453_11780)	-	2514819..2515670 (+)	852	WP_003096618.1	SDR family oxidoreductase	-
RQ453_RS11785 (RQ453_11785)	-	2515670..2516470 (+)	801	WP_033996189.1	AraC family transcriptional regulator	-
RQ453_RS11790 (RQ453_11790)	-	2516537..2517157 (+)	621	WP_003096613.1	LysE family translocator	-
RQ453_RS11795 (RQ453_11795)	-	2517164..2517895 (-)	732	WP_003096611.1	hypothetical protein	-
RQ453_RS11800 (RQ453_11800)	-	2517950..2518330 (-)	381	WP_003096609.1	RidA family protein	-

Sequence

Protein

Download Length: 691 a.a. Molecular weight: 76178.88 Da Isoelectric Point: 7.2591

                                >NTDB_id=810254 RQ453_RS11770 WP_003096624.1 2511677..2513752(-) (recG) [Pseudomonas aeruginosa strain CP-1]

MTELSRVPVTALKGVGAALAEKLARVGLETLQDILFHLPLRYQDRTRVTAIGALRPGADAVVEGVVAGADVVMGRRRSLL

VRLQDGSGTLSLRFYHFSQAQKDGLKRGTHLRCYGEVRPGASGLEIYHPEYRALNGDEPIPVEQTLTPIYPTTEGLTQQR

LRQLSQQALAMLGPSSLPDWLPAELARDYQLGPLDQAIRYLHRPPPDADIEELAEGRHWAQLRLAFEELLTHQLSLQRLR

EAVRSQAAPRLPAASRLPKRFLANLGFQPTGAQRRVGAEIAYDLAQDEPMLRLVQGDVGAGKTVVAALAALQAIEAGYQV

ALMAPTEILAEQHFLNFSKWLQPLDIEVAWLAGKLKGKARAAALERIGDGAPMVVGTHALFQDEVKFKRLALAIIDEQHR

FGVQQRLALRQKGVDGRLCPHQLIMTATPIPRTLAMSAYADLDTSILDELPPGRTPVNTVLVADSRRIEVIERVRAACRE

GRQAYWVCTLIEESEELTCQAAETTYEELSSALGELRVGLIHGRMKPADKAVVMEAFKEGMLQLLVATTVIEVGVDVPNA

SLMIIENPERLGLAQLHQLRGRVGRGSAASHCVLLYHPPLSQIGRERLGIMRETSDGFVIAEKDLELRGPGEMLGTRQTG

LLQFKVADLMRDADLLPAVRDAAQSLLAHWPQHVSPLLERWLRHGQQYGQV

Nucleotide

Download Length: 2076 bp

                                >NTDB_id=810254 RQ453_RS11770 WP_003096624.1 2511677..2513752(-) (recG) [Pseudomonas aeruginosa strain CP-1]

ATGACCGAGCTGTCCAGGGTCCCGGTCACCGCGCTAAAGGGCGTAGGCGCCGCGCTGGCGGAGAAGCTCGCTCGGGTAGG

CCTGGAAACCCTGCAGGACATCCTGTTCCACCTGCCCCTGCGCTACCAGGACCGTACCCGCGTCACCGCCATCGGCGCCC

TGCGGCCAGGGGCCGACGCGGTGGTCGAGGGCGTGGTGGCCGGCGCCGACGTGGTGATGGGGCGCCGCCGCAGCCTGCTG

GTGCGCCTGCAGGACGGCAGCGGCACCCTGAGCCTGCGCTTCTACCATTTCAGCCAGGCGCAGAAGGACGGCCTGAAGCG

CGGCACCCACCTGCGCTGCTACGGCGAAGTCCGGCCGGGTGCATCGGGCCTGGAGATCTACCATCCGGAATACCGCGCGC

TGAACGGCGACGAACCGATTCCGGTGGAGCAGACCCTGACGCCGATCTACCCGACTACCGAAGGACTCACCCAGCAGCGC

CTGCGCCAGTTGAGCCAACAGGCCCTGGCCATGCTCGGTCCCAGCAGCCTGCCCGACTGGCTACCGGCGGAACTGGCCCG

CGATTATCAACTTGGCCCGCTCGATCAGGCGATCCGCTACCTGCACCGGCCGCCGCCGGATGCCGACATCGAGGAACTGG

CCGAAGGCCGGCACTGGGCGCAGTTGCGCCTGGCCTTCGAAGAACTGCTGACCCACCAGTTATCCCTGCAGCGCCTGCGC

GAAGCCGTGCGTTCGCAGGCAGCGCCGCGCTTGCCGGCGGCCAGCCGCTTGCCGAAACGCTTCCTTGCCAACCTCGGCTT

CCAGCCAACCGGCGCGCAACGCCGGGTCGGCGCGGAGATCGCCTACGACCTGGCCCAGGACGAACCGATGCTGCGCCTGG

TGCAAGGCGACGTCGGCGCCGGCAAGACCGTGGTCGCCGCCCTCGCCGCCCTGCAAGCCATAGAGGCCGGCTACCAGGTG

GCGCTGATGGCGCCGACCGAGATCCTCGCCGAGCAGCATTTCCTCAACTTCAGCAAGTGGCTCCAGCCGCTGGACATCGA

AGTCGCCTGGCTGGCCGGCAAGCTCAAGGGCAAGGCCCGCGCGGCGGCACTGGAACGCATCGGCGACGGCGCGCCGATGG

TGGTCGGCACCCACGCGCTGTTCCAGGATGAAGTGAAATTCAAGCGCCTTGCACTGGCGATCATCGACGAACAGCACCGC

TTCGGCGTGCAGCAGCGCCTGGCCCTGCGCCAGAAGGGCGTGGACGGCAGGCTCTGCCCGCACCAGTTGATCATGACCGC

CACGCCGATCCCGCGGACCCTGGCGATGAGCGCCTATGCCGACCTCGACACCTCGATCCTCGACGAGCTGCCGCCCGGGC

GTACCCCGGTGAATACCGTGCTGGTGGCCGACAGCCGCCGTATCGAGGTGATCGAGCGAGTCCGCGCGGCTTGCCGCGAA

GGGCGCCAGGCCTACTGGGTGTGTACCCTGATCGAAGAGTCCGAGGAGCTTACCTGCCAGGCCGCCGAGACCACCTACGA

AGAGCTTTCCTCGGCGCTGGGCGAACTGCGTGTCGGCCTGATCCACGGGCGCATGAAGCCGGCGGACAAGGCCGTGGTGA

TGGAGGCCTTCAAGGAAGGCATGTTGCAACTGCTGGTGGCGACCACGGTGATCGAGGTCGGCGTCGACGTGCCCAACGCC

AGTCTGATGATCATCGAGAACCCCGAGCGCCTTGGCCTGGCCCAACTGCACCAGTTGCGCGGCCGGGTTGGCCGGGGCAG

CGCCGCCAGCCACTGCGTGCTGCTCTACCACCCACCGCTGTCGCAGATCGGCCGCGAGCGGCTGGGCATCATGCGCGAAA

CCAGCGACGGCTTCGTCATCGCCGAGAAGGACCTGGAATTGCGCGGCCCCGGCGAAATGCTCGGCACCCGCCAGACCGGC

CTGCTGCAATTCAAGGTCGCCGACCTGATGCGCGACGCAGACCTGCTGCCGGCGGTCCGCGATGCCGCCCAATCCCTCCT

GGCGCACTGGCCGCAGCATGTCAGCCCGCTGCTCGAACGGTGGTTGCGCCACGGCCAGCAATACGGTCAAGTGTGA

Domains

Predicted by InterProScan.

DEAD/DEAH box helicase (DEAD)

(293-430)

Helicase conserved C-terminal domain (Helicase_C)

(479-586)

ATP-dependent DNA helicase RecG, domain 3, C-terminal (RecG_dom3_C)

(614-675)

RecG wedge domain (RecG_wedge)

(12-170)

Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.

3D structure

Source	ID	Structure
AlphaFold DB	A0A0H2ZJ60

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.

Visualization of predicted probability:

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	H_a-value
recG	Neisseria meningitidis strain C311	50.373	97.106	0.489
recG/mmsA	Streptococcus pneumoniae R6	40.868	96.671	0.395
recG/mmsA	Streptococcus pneumoniae R36A	40.868	96.671	0.395
recG	Bacillus subtilis subsp. subtilis str. 168	40.356	97.54	0.394

Detailed information NTG0810254