Detailed information NTG0809125

Bioinformatically predicted

Overview

• Name: uvrB
• Type: Machinery gene
• Locus tag: RMP64_RS05390
• Genome accession: NZ_CP135093
• Coordinates: 1080458..1082443 (-)
• Length: 661 a.a.
• NCBI ID: WP_024394617.1
• Uniprot ID: -
• Organism: Streptococcus suis strain 1652329
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1075458..1087443

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RMP64_RS05390 (RMP64_05390)	uvrB	1080458..1082443 (-)	1986	WP_024394617.1	excinuclease ABC subunit UvrB	Machinery gene
RMP64_RS05395 (RMP64_05395)	-	1082641..1084839 (+)	2199	WP_024394618.1	ABC transporter substrate-binding protein/permease	-
RMP64_RS05400 (RMP64_05400)	-	1084839..1085579 (+)	741	WP_002940438.1	amino acid ABC transporter ATP-binding protein	-
RMP64_RS05405 (RMP64_05405)	-	1085635..1086126 (-)	492	WP_002935171.1	GNAT family N-acetyltransferase	-

Sequence

Protein

• Length: 661 a.a.
• Molecular weight: 75578.55 Da
• Isoelectric Point: 4.5960

>NTDB_id=809125 RMP64_RS05390 WP_024394617.1 1080458..1082443(-) (uvrB) [Streptococcus suis strain 1652329]
MINRNTENQFKLVSKYSPSGDQPQAIETLVDNIEGGEKAQILMGATGTGKTYTMSQVIARVNKPTLVIAHNKTLAGQLYS
EFKEFFPENAVEYFVSYYDYYQPEAYVPSSDTYIEKDSSVNDEIDKLRHSATSALLERNDVIVVASVSCIYGLGSPKEYS
DSVVSLRPGQEISRDQLLNSLVDIQFERNDIDFQRGRFRVRGDVVEIFPASRDEHAFRVEFFGDEIDRIREIESLTGKVL
GDVDHLAIFPATHFVTNDDHMETAIAKIQAELEEQLKVFEAEGKLLEAQRLKQRTDYDIEMLREIGYTNGVENYSRHMDG
RSEGEPPYTLLDFFPEDYLIMIDESHMTMGQIKGMYNGDRSRKEMLVNYGFRLPSALDNRPLRREEFESHVHQIVYVSAT
PGDYEMEQTDTVVEQIIRPTGLLDPEVEVRPTMGQMDDLLGEINARVEKGERTFITTLTKKMAEDLTDYLKEMGVKVKYM
HSDIKTLERTEIIRDLRLGVFDVLIGINLLREGIDVPEVSLVAILDADKEGFLRNERGLIQTIGRAARNSEGHVIMYADK
VTESMRKAMDETARRRQIQMAYNEEHGIIPQTIKKEIRDLISVTKAVTQDKEEVVDFNALNKDERKAMIKKLEGQMQEAA
EVLDFELAAQIRDMVIELKNM

Nucleotide

• Length: 1986 bp

>NTDB_id=809125 RMP64_RS05390 WP_024394617.1 1080458..1082443(-) (uvrB) [Streptococcus suis strain 1652329]
ATGATCAATCGAAATACTGAAAACCAATTTAAACTTGTATCTAAATACTCACCGTCTGGTGATCAGCCCCAAGCCATTGA
AACCTTGGTTGATAACATCGAGGGGGGCGAAAAAGCCCAGATTCTCATGGGGGCGACTGGTACGGGCAAGACCTACACCA
TGAGTCAGGTCATTGCCCGTGTCAATAAGCCCACTCTAGTCATCGCCCACAACAAGACTCTAGCTGGTCAGCTTTACAGC
GAGTTCAAGGAATTCTTCCCAGAAAATGCGGTCGAATACTTCGTATCTTACTATGATTACTACCAGCCAGAGGCCTATGT
ACCGTCTAGCGATACCTATATCGAGAAGGACAGTTCGGTCAATGATGAGATTGACAAACTCCGTCACTCAGCGACGTCAG
CTCTTCTCGAACGAAATGATGTCATCGTTGTGGCTTCGGTTTCCTGTATCTACGGTTTGGGATCGCCCAAGGAATATTCA
GATAGCGTGGTTAGTCTGCGACCCGGCCAGGAGATTTCCCGAGACCAGTTGCTCAATTCCTTGGTAGATATCCAGTTTGA
GCGCAACGACATCGACTTCCAACGGGGACGCTTCCGTGTACGTGGAGATGTGGTGGAGATTTTCCCAGCTTCTCGTGATG
AACACGCCTTCCGTGTGGAGTTTTTCGGGGATGAAATTGACCGCATTCGTGAGATTGAAAGCCTGACAGGTAAGGTTTTG
GGCGATGTGGACCACTTGGCGATTTTCCCTGCCACCCACTTCGTGACCAACGATGACCATATGGAAACGGCTATTGCCAA
GATTCAGGCGGAACTGGAAGAGCAGCTCAAGGTCTTTGAGGCAGAAGGAAAACTCTTAGAAGCTCAGCGATTGAAACAAC
GGACCGACTACGACATCGAGATGCTTCGGGAAATAGGTTACACCAACGGAGTTGAGAACTATTCACGACACATGGACGGG
CGAAGCGAGGGCGAGCCTCCGTACACACTGCTGGACTTTTTCCCTGAAGACTACCTGATTATGATTGACGAGAGCCACAT
GACCATGGGGCAGATTAAGGGGATGTACAATGGTGACCGCTCACGCAAGGAGATGTTGGTCAACTATGGCTTCCGCCTCC
CGAGTGCACTGGACAATCGTCCGCTGCGCAGGGAAGAATTTGAGAGCCATGTCCACCAGATTGTCTATGTATCTGCGACG
CCGGGTGACTATGAAATGGAGCAGACCGATACCGTTGTCGAGCAGATCATTCGGCCGACAGGGCTTCTGGATCCAGAAGT
GGAAGTCCGTCCAACCATGGGCCAAATGGATGACCTCTTGGGCGAAATCAATGCCCGTGTTGAGAAAGGTGAGCGGACCT
TTATCACTACCCTGACCAAGAAAATGGCAGAGGACTTGACTGACTACCTGAAAGAAATGGGCGTCAAGGTCAAGTATATG
CACTCGGATATCAAGACCTTGGAGCGTACGGAGATTATTCGTGATTTGCGTTTGGGCGTCTTTGATGTCTTGATAGGGAT
TAACCTCTTGCGTGAAGGGATTGACGTGCCAGAAGTCAGTCTGGTTGCTATCTTAGACGCAGACAAGGAAGGCTTCCTCC
GTAATGAGCGTGGACTCATCCAGACAATTGGTCGTGCGGCCCGTAACTCTGAAGGTCATGTCATTATGTATGCGGACAAG
GTCACCGAGTCCATGCGCAAGGCTATGGACGAAACAGCCCGCCGCCGTCAAATCCAGATGGCTTATAATGAAGAACATGG
TATTATCCCACAAACTATCAAGAAGGAAATCCGTGACCTGATTAGCGTAACCAAGGCTGTCACTCAGGACAAGGAAGAAG
TGGTGGACTTCAATGCCCTCAACAAAGACGAACGCAAGGCTATGATCAAGAAACTGGAAGGTCAAATGCAGGAAGCTGCA
GAAGTGCTTGACTTTGAACTGGCAGCCCAGATTCGTGATATGGTCATCGAGTTGAAGAATATGTAG

Domains

Predicted by InterProScan.

• Ultra-violet resistance protein B (UvrB) (556-598)

• Type III restriction enzyme, res subunit (ResIII) (20-143)

• UvrB interaction domain (UvrB_inter) (164-254)

• UvrB/uvrC motif (UVR) (626-660)

• Helicase conserved C-terminal domain (Helicase_C) (445-549)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrB	Streptococcus pneumoniae R6	91.074	100	0.911
uvrB	Streptococcus pneumoniae D39	91.074	100	0.911
uvrB	Streptococcus pneumoniae TIGR4	90.923	100	0.909