Detailed information NTG0808932

Bioinformatically predicted

Overview

• Name: uvrB
• Type: Machinery gene
• Locus tag: RMP65_RS04490
• Genome accession: NZ_CP135089
• Coordinates: 898826..900811 (+)
• Length: 661 a.a.
• NCBI ID: WP_313680878.1
• Uniprot ID: -
• Organism: Streptococcus suis strain ID34567
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 893826..905811

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RMP65_RS04475 (RMP65_04475)	-	895138..895629 (+)	492	WP_074414427.1	GNAT family N-acetyltransferase	-
RMP65_RS04480 (RMP65_04480)	-	895690..896430 (-)	741	WP_002940438.1	amino acid ABC transporter ATP-binding protein	-
RMP65_RS04485 (RMP65_04485)	-	896430..898628 (-)	2199	WP_313912518.1	ABC transporter substrate-binding protein/permease	-
RMP65_RS04490 (RMP65_04490)	uvrB	898826..900811 (+)	1986	WP_313680878.1	excinuclease ABC subunit UvrB	Machinery gene

Sequence

Protein

• Length: 661 a.a.
• Molecular weight: 75576.58 Da
• Isoelectric Point: 4.5976

>NTDB_id=808932 RMP65_RS04490 WP_313680878.1 898826..900811(+) (uvrB) [Streptococcus suis strain ID34567]
MINRNTENQFKLVSKYAPSGDQPQAIETLVDNIEGGEKAQILMGATGTGKTYTMSQVIARVNKPTLVIAHNKTLAGQLYS
EFKEFFPENAVEYFVSYYDYYQPEAYVPSSDTYIEKDSSVNDEIDKLRHSATSALLERNDVIVVASVSCIYGLGSPKEYS
DSVVSLRPGQEISRDQLLNSLVDIQFERNDIDFQRGRFRVRGDVVEIFPASRDEHAFRVEFFGDEIDRIREIESLTGKVL
GDVDHLAIFPATHFVTNDDHMETAIAKIQAELEEQLKVFEAEGKLLEAQRLKQRTDYDIEMLREMGYTNGVENYSRHMDG
RSEGEPPYTLLDFFPEDYLIMIDESHMTMGQIKGMYNGDRSRKEMLVNYGFRLPSALDNRPLRREEFESHVHQIVYVSAT
PGDYEMEQTDTVVEQIIRPTGLLDPEVEVRPTMGQMDDLLGEINARVEKGERTFITTLTKKMAEDLTDYLKEMGVKVKYM
HSDIKTLERTEIIRDLRLGVFDVLIGINLLREGIDVPEVSLVAILDADKEGFLRNERGLIQTIGRAARNSEGHVIMYADK
VTESMRKAMEETARRRQIQMAYNEEHGIIPQTIKKEIRDLISVTKAVTQDKEEVVDFNALNKDERKAMIKKLEGQMQEAA
EVLDFELAAQIRDMVIELKNL

Nucleotide

• Length: 1986 bp

>NTDB_id=808932 RMP65_RS04490 WP_313680878.1 898826..900811(+) (uvrB) [Streptococcus suis strain ID34567]
ATGATCAATCGAAATACTGAAAACCAATTTAAACTTGTGTCAAAATATGCACCGTCTGGTGACCAGCCCCAAGCCATTGA
AACCTTGGTGGATAATATCGAGGGTGGCGAAAAAGCCCAGATTCTCATGGGGGCGACTGGTACTGGTAAGACCTACACCA
TGAGCCAGGTCATTGCCCGTGTCAATAAGCCCACTCTAGTCATCGCCCACAATAAGACCCTAGCTGGTCAGCTCTACAGT
GAGTTCAAGGAATTCTTCCCAGAAAATGCGGTCGAATACTTCGTGTCTTACTATGATTACTACCAGCCAGAAGCCTATGT
ACCGTCTAGCGATACCTATATCGAGAAGGACAGTTCGGTCAATGATGAAATTGACAAACTCCGTCACTCAGCGACCTCAG
CTTTGCTAGAACGCAACGATGTCATCGTCGTGGCCTCCGTTTCCTGTATCTACGGTTTGGGATCGCCCAAGGAATATTCA
GATAGCGTGGTCAGCCTCCGCCCAGGTCAGGAGATTTCCCGTGACCAGTTGCTTAATTCTCTGGTAGATATCCAGTTTGA
GCGGAACGACATCGACTTCCAACGGGGGCGTTTCCGTGTACGTGGCGATGTGGTGGAGATTTTCCCAGCTTCTCGTGATG
AGCATGCCTTTCGTGTGGAGTTTTTCGGGGATGAAATCGACCGCATTCGTGAGATTGAGAGCCTGACAGGTAAGGTTTTG
GGCGATGTGGACCACTTGGCGATTTTCCCTGCCACCCACTTCGTGACCAACGATGACCACATGGAAACGGCTATTGCTAA
GATTCAGGCGGAACTGGAAGAGCAGCTCAAGGTCTTTGAAGCAGAAGGAAAACTCTTAGAAGCTCAGCGATTGAAACAAC
GGACCGACTACGATATCGAAATGCTTCGGGAAATGGGCTACACCAACGGAGTTGAGAACTATTCACGACACATGGATGGG
CGAAGCGAGGGCGAGCCTCCTTATACTTTGCTGGACTTTTTCCCTGAAGACTATCTGATTATGATTGACGAGAGCCACAT
GACTATGGGGCAGATTAAGGGGATGTACAATGGTGACCGCTCACGCAAGGAGATGCTGGTCAATTATGGTTTCCGCCTCC
CAAGTGCACTGGATAATCGTCCGCTGCGCAGGGAAGAATTTGAGAGCCATGTCCACCAGATTGTCTATGTATCTGCGACG
CCGGGTGACTATGAAATGGAGCAGACCGATACCGTTGTCGAGCAGATTATTCGGCCGACAGGGCTTTTGGATCCAGAAGT
GGAAGTCCGTCCAACTATGGGCCAAATGGATGACCTCTTGGGTGAAATCAATGCCCGTGTTGAGAAAGGTGAGCGGACCT
TTATCACTACCCTGACTAAGAAAATGGCAGAGGACTTGACTGACTACCTGAAAGAAATGGGCGTCAAGGTCAAGTATATG
CACTCGGACATCAAGACCTTGGAGCGTACGGAGATTATCCGTGATTTGCGCCTGGGTGTCTTTGATGTCTTGATAGGGAT
TAACTTGCTTCGTGAGGGGATTGACGTGCCAGAAGTCAGTCTGGTGGCTATTCTAGATGCTGACAAGGAAGGTTTCCTCC
GTAATGAACGGGGGCTCATCCAGACAATTGGTCGGGCGGCTCGTAACTCTGAAGGTCATGTGATTATGTATGCGGACAAG
GTCACTGAGTCCATGCGGAAGGCTATGGAAGAAACCGCCCGCCGCCGTCAAATCCAGATGGCTTATAATGAAGAACATGG
TATTATCCCACAAACTATTAAGAAGGAAATCCGTGACCTGATTAGCGTGACCAAGGCTGTCACTCAGGATAAGGAAGAAG
TGGTGGACTTCAATGCCCTCAACAAAGACGAACGCAAGGCTATGATCAAGAAACTGGAAGGTCAAATGCAGGAAGCAGCA
GAAGTGCTTGACTTTGAACTGGCAGCCCAGATTCGTGATATGGTTATTGAGTTGAAGAATCTGTAG

Domains

Predicted by InterProScan.

• Ultra-violet resistance protein B (UvrB) (556-598)

• UvrB interaction domain (UvrB_inter) (164-254)

• Type III restriction enzyme, res subunit (ResIII) (21-143)

• UvrB/uvrC motif (UVR) (626-660)

• Helicase conserved C-terminal domain (Helicase_C) (445-549)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrB	Streptococcus pneumoniae R6	91.225	100	0.912
uvrB	Streptococcus pneumoniae D39	91.225	100	0.912
uvrB	Streptococcus pneumoniae TIGR4	91.074	100	0.911