Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   P4829_RS16180 Genome accession   NZ_CP120846
Coordinates   3194061..3196370 (-) Length   769 a.a.
NCBI ID   WP_063637893.1    Uniprot ID   -
Organism   Bacillus atrophaeus strain MBLB1156     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3189061..3201370
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P4829_RS16140 (P4829_16140) - 3189532..3189963 (+) 432 WP_003327161.1 Na(+)/H(+) antiporter subunit B -
  P4829_RS16145 (P4829_16145) - 3189963..3190304 (+) 342 WP_003327160.1 Na(+)/H(+) antiporter subunit C -
  P4829_RS16150 (P4829_16150) - 3190297..3191778 (+) 1482 WP_061669364.1 Na+/H+ antiporter subunit D -
  P4829_RS16155 (P4829_16155) - 3191784..3192260 (+) 477 WP_003327158.1 Na+/H+ antiporter subunit E -
  P4829_RS16160 (P4829_16160) - 3192260..3192544 (+) 285 WP_010789784.1 Na(+)/H(+) antiporter subunit F1 -
  P4829_RS16165 (P4829_16165) mnhG 3192528..3192902 (+) 375 WP_003327156.1 monovalent cation/H(+) antiporter subunit G -
  P4829_RS16170 (P4829_16170) - 3192941..3193321 (-) 381 WP_010789785.1 hotdog fold thioesterase -
  P4829_RS16175 (P4829_16175) comA 3193339..3193980 (-) 642 WP_003327154.1 response regulator transcription factor Regulator
  P4829_RS16180 (P4829_16180) comP 3194061..3196370 (-) 2310 WP_063637893.1 histidine kinase Regulator
  P4829_RS16185 (P4829_16185) comX 3196386..3196607 (-) 222 WP_063637894.1 competence pheromone ComX -
  P4829_RS16190 (P4829_16190) - 3196604..3197473 (-) 870 WP_063638377.1 polyprenyl synthetase family protein -
  P4829_RS16195 (P4829_16195) degQ 3197657..3197800 (-) 144 WP_003327149.1 degradation enzyme regulation protein DegQ Regulator
  P4829_RS16200 (P4829_16200) - 3198260..3198619 (+) 360 WP_063637895.1 hypothetical protein -
  P4829_RS16205 (P4829_16205) - 3198638..3199870 (-) 1233 WP_003327147.1 EAL and HDOD domain-containing protein -

Sequence


Protein


Download         Length: 769 a.a.        Molecular weight: 89142.48 Da        Isoelectric Point: 8.5523

>NTDB_id=808871 P4829_RS16180 WP_063637893.1 3194061..3196370(-) (comP) [Bacillus atrophaeus strain MBLB1156]
MYRNNNFYKFLSLAFIILSFVYVIYLTYISVFNIFVGADVKINEQGKLEVTKVVDYTDEYYSGVKKGDIILEVDGEKGSE
VSLTSGRLVNVKSLIVERDNKSFHLQNVSLISEENLFMYLIPIISYSICLFCIFFVYRINKVRKSSSAFVLILFLLFVST
AYVSACGARRGEEVSTYLLVLTLVSCPILYIHFIYKYFTELGTKLFKKKILIIMYMLPLINLLLEAILSNGLKSSTFLSH
LNLISFFVLVLTVSILIYQGIRKIKQNEQKSILKVLAYTNILSFSPFIIFFIIPYVLFDTYVSPFSLAAFTLVIPFSLVY
QFMTNRLYNIDFVIGRLKYYGFLAITPTVIVVTIFNYIQKPKDNIYSVKLTIVIYLLMFAVFYFKEIIDFRFKLKRFTEK
FNYQDGIFKFTQIIKQASSVDQVLNHFKNTILEVLNIDNACVYDNSKGKITLLSKNNFKDLTYKNYEQYVQKFSGDIGKI
IEFKQGFIIKIDERGDRSFLVLCFSSYNTFKLTRDEIAWLQTLAFYTNVSLENVMKIEELMVHLEDLKQQESNPVWLKKL
MFAIEEKQRSDLARDLHDSVLQDLISLKRQCELFLADFKKEDPCKNEVQDKLVQMNQQMSDVILMTRETCHELRPQLLYD
LGLVKALSKLVAQQQESAPFHIRLNTGRFTASLDLDSQLNLYRIIQEFLSNAMKHSQAGEVLIMLISFQNKIVLHYEDDG
VGFDKEKLNEQSMSMGLSGIKERVRALDGHLRIDTSVGNGLRADIEMEL

Nucleotide


Download         Length: 2310 bp        

>NTDB_id=808871 P4829_RS16180 WP_063637893.1 3194061..3196370(-) (comP) [Bacillus atrophaeus strain MBLB1156]
ATGTACAGGAATAATAACTTCTATAAATTTTTGTCTCTAGCATTTATCATTTTAAGTTTTGTTTATGTGATTTACCTAAC
CTATATTTCTGTTTTTAACATTTTCGTAGGTGCGGATGTTAAGATTAATGAACAGGGTAAGTTAGAGGTTACTAAAGTTG
TGGATTATACAGATGAATATTATTCAGGTGTAAAAAAGGGTGACATCATCCTTGAAGTAGATGGGGAAAAAGGCAGCGAA
GTTTCGTTGACAAGCGGAAGATTGGTCAATGTAAAAAGCTTAATTGTTGAGAGAGATAATAAATCATTTCATCTACAAAA
TGTAAGCTTAATCAGTGAAGAAAATTTGTTTATGTATCTCATTCCAATCATCTCTTATTCAATCTGTTTATTTTGTATAT
TTTTTGTTTACAGAATAAACAAAGTAAGGAAATCATCTTCTGCTTTTGTTTTAATTTTATTTTTGTTATTTGTATCAACA
GCTTATGTAAGTGCCTGCGGAGCGAGAAGAGGCGAGGAGGTTAGCACTTACCTACTTGTCTTAACTTTAGTAAGTTGTCC
AATTTTGTATATCCATTTTATATATAAATACTTTACGGAATTAGGCACTAAGCTATTTAAAAAGAAGATTTTAATCATTA
TGTATATGCTCCCGCTAATAAATCTTTTATTGGAAGCTATTCTGAGCAATGGATTAAAATCTTCGACTTTTTTGTCACAT
CTGAACTTGATTTCCTTCTTTGTCTTAGTTCTTACTGTATCTATTCTAATCTATCAAGGCATAAGAAAAATCAAACAAAA
TGAGCAAAAGTCGATTTTGAAGGTCCTTGCTTATACGAATATCCTATCTTTCAGTCCCTTTATTATCTTTTTTATTATTC
CATATGTATTGTTTGATACGTATGTTTCACCCTTTAGTTTAGCAGCTTTTACACTTGTTATACCTTTTTCTTTAGTATAT
CAATTTATGACCAATAGACTTTATAATATTGACTTTGTTATAGGAAGGCTTAAGTACTATGGTTTTTTAGCAATTACTCC
TACTGTTATTGTGGTTACCATATTTAATTATATTCAAAAACCAAAAGATAACATTTATTCAGTTAAACTAACAATTGTAA
TATACTTGCTTATGTTTGCTGTTTTTTACTTTAAAGAGATCATTGACTTTCGTTTCAAGTTAAAAAGATTTACGGAGAAA
TTTAATTATCAAGATGGAATTTTTAAATTTACTCAGATAATAAAACAAGCATCATCGGTAGACCAAGTGCTTAATCACTT
TAAAAATACAATCTTAGAAGTACTAAATATAGATAATGCTTGCGTATATGATAATTCTAAAGGGAAAATTACCCTTCTTA
GCAAGAACAACTTTAAAGATCTAACTTATAAAAATTATGAGCAATATGTGCAAAAGTTTTCAGGCGATATTGGGAAAATT
ATAGAGTTTAAACAAGGTTTTATTATTAAAATAGATGAACGGGGAGACAGATCATTTTTAGTACTCTGTTTCTCAAGTTA
TAATACCTTTAAATTAACAAGAGATGAAATTGCATGGCTTCAAACATTAGCGTTTTATACAAATGTTTCATTGGAAAACG
TAATGAAGATTGAAGAATTGATGGTGCATCTTGAAGATTTAAAACAACAAGAATCCAACCCGGTATGGCTCAAAAAACTC
ATGTTCGCCATCGAAGAAAAACAACGATCCGACCTGGCGCGTGACCTCCATGACTCCGTTCTTCAGGATTTGATCTCCTT
AAAACGGCAATGCGAGCTGTTTCTTGCTGATTTTAAGAAGGAAGATCCTTGTAAGAATGAGGTGCAGGACAAGCTGGTGC
AAATGAATCAGCAGATGTCTGATGTGATTTTGATGACGAGGGAGACGTGCCATGAATTGCGGCCGCAGCTGCTGTATGAT
TTGGGATTGGTAAAGGCGCTGTCAAAGCTTGTTGCGCAGCAGCAGGAAAGCGCGCCGTTTCATATTCGGCTGAATACGGG
AAGGTTTACGGCATCGCTCGATCTTGATTCTCAGCTGAATTTGTACCGGATTATTCAAGAGTTTTTATCAAATGCCATGA
AGCATTCCCAAGCCGGCGAGGTGCTGATTATGCTGATCAGTTTTCAAAATAAAATTGTTCTTCATTATGAGGATGACGGC
GTTGGCTTTGATAAGGAAAAATTGAATGAACAATCGATGAGTATGGGGCTTTCGGGAATTAAAGAGCGGGTTCGTGCGTT
AGACGGGCACCTTCGGATCGATACAAGCGTAGGAAATGGATTGCGAGCCGATATTGAAATGGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

53.377

100

0.534