Detailed information    

insolico Bioinformatically predicted

Overview

Name   comP   Type   Regulator
Locus tag   P3T49_RS16175 Genome accession   NZ_CP120723
Coordinates   3192906..3195203 (-) Length   765 a.a.
NCBI ID   WP_277713830.1    Uniprot ID   -
Organism   Bacillus atrophaeus strain NX-12     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context

Location: 3187906..3200203
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P3T49_RS16135 - 3188377..3188808 (+) 432 WP_003327161.1 Na(+)/H(+) antiporter subunit B -
  P3T49_RS16140 - 3188808..3189149 (+) 342 WP_003327160.1 Na(+)/H(+) antiporter subunit C -
  P3T49_RS16145 - 3189142..3190623 (+) 1482 WP_277713828.1 Na+/H+ antiporter subunit D -
  P3T49_RS16150 - 3190629..3191105 (+) 477 WP_003327158.1 Na+/H+ antiporter subunit E -
  P3T49_RS16155 - 3191105..3191389 (+) 285 WP_061570549.1 Na(+)/H(+) antiporter subunit F1 -
  P3T49_RS16160 mnhG 3191373..3191747 (+) 375 WP_061570550.1 monovalent cation/H(+) antiporter subunit G -
  P3T49_RS16165 - 3191786..3192166 (-) 381 WP_199679676.1 hotdog fold thioesterase -
  P3T49_RS16170 comA 3192184..3192825 (-) 642 WP_003327154.1 response regulator transcription factor Regulator
  P3T49_RS16175 comP 3192906..3195203 (-) 2298 WP_277713830.1 histidine kinase Regulator
  P3T49_RS16180 comX 3195214..3195378 (-) 165 WP_106046982.1 competence pheromone ComX -
  P3T49_RS16185 - 3195391..3196251 (-) 861 WP_216412504.1 polyprenyl synthetase family protein -
  P3T49_RS16190 degQ 3196435..3196578 (-) 144 WP_003327149.1 degradation enzyme regulation protein DegQ Regulator
  P3T49_RS16195 - 3197038..3197397 (+) 360 WP_063637895.1 hypothetical protein -
  P3T49_RS16200 - 3197416..3198648 (-) 1233 WP_003327147.1 EAL and HDOD domain-containing protein -

Sequence

Protein


Download         Length: 765 a.a.        Molecular weight: 88568.82 Da        Isoelectric Point: 7.8594

>NTDB_id=808387 P3T49_RS16175 WP_277713830.1 3192906..3195203(-) (comP) [Bacillus atrophaeus strain NX-12]
MKAWHNKISILLILISLVYVGYLTYISSNKLLVGTTLEKNKANEAVITNIEEFSIAYDSGVQKGDVIKRINNHKLTSSFD
VQKNDLNHVSSLVVERDGKEIKINFDLMSGSNFSTLLIPLIFYIVCLFCCFFILKINESKKLLSALILIIFLLSASLAYV
SAGGSAKGDLLSRCIMVFTLTTVLLNYLLFLYQYFKELGTTLFNKKVFILYFISIFNVAFELLRENLFFGDYVPKLNLLT
FFILFIIVVVYFGVVLYKNKDTEQAHILKALTIINIISFSPFLCLYLIPYVFLNVQYVSSFVTASFMLLIPFSLVYQFMT
NKIYNVDFILSRLKYYGFLALTPTIILIVTFELLRRPEEDYHYIRLAVLIYIIMVAVFYYKEVLDFRFRLKRVSERFNYQ
DSIYKFTQLIRDSSSVKQVFGELKTTILEVTVVSRAHIYEVTFDRNIKPYEEVNLHSYHDTYQKQFSKVISEIGKIVEFN
NGFVMKIGERGGKSFVILCLSKMNTPRLTLEEISWLKTLAFYTNVSIENVMKIEELMSHLEEIKQQESNPVWLKKLMYTI
EEKQRSDLARDLHDSVLQDLISLKRQCELFLADFKKEDPCKNEVQDKLVQMNQQMSDVILMTRETCHELRPQLLYDLGLV
KALSKLVAQQQESAPFHIRLNTGRFTASLDLDSQLNLYRIIQEFLSNAMKHSQAGEVLIMLISFQNKIVLHYEDDGVGFD
KEKLNEQSMSMGLSGIKERVRALDGHLRIDTSVGNGLRADIEMEL

Nucleotide


Download         Length: 2298 bp        

>NTDB_id=808387 P3T49_RS16175 WP_277713830.1 3192906..3195203(-) (comP) [Bacillus atrophaeus strain NX-12]
ATGAAGGCATGGCACAATAAAATTTCAATTTTATTGATTTTAATTAGTTTAGTCTATGTAGGTTATTTAACGTATATTAG
TTCAAATAAACTATTAGTTGGAACAACTCTTGAAAAAAACAAAGCAAATGAAGCAGTAATAACAAATATAGAAGAATTTT
CTATTGCTTATGATTCTGGAGTGCAAAAAGGTGACGTTATAAAGCGTATAAATAATCATAAATTAACCAGTTCTTTTGAT
GTTCAAAAGAATGACTTAAATCACGTCAGTTCTTTGGTTGTCGAGCGAGATGGCAAAGAAATAAAAATTAATTTTGACTT
AATGAGCGGTAGTAATTTTTCCACTCTTCTAATCCCATTAATTTTTTATATAGTTTGTCTATTTTGCTGTTTCTTTATAT
TAAAAATAAATGAATCAAAAAAGTTGCTATCTGCTTTAATTTTAATCATTTTTCTTTTGTCTGCTTCTCTGGCATATGTA
AGTGCAGGAGGATCTGCTAAGGGAGATTTGTTAAGCAGATGCATTATGGTATTTACGTTAACAACTGTACTGCTTAACTA
TCTACTCTTTCTGTATCAATATTTTAAAGAGCTAGGCACTACATTATTTAACAAGAAAGTTTTCATTTTATATTTTATTT
CTATATTTAATGTAGCATTTGAACTGTTACGCGAGAATCTGTTTTTTGGGGATTATGTGCCTAAATTAAATCTACTTACT
TTTTTCATTTTATTTATAATAGTAGTTGTTTATTTTGGTGTCGTTTTATACAAGAATAAGGATACTGAACAAGCACATAT
TTTAAAGGCTCTTACAATAATTAATATCATTTCTTTTTCGCCATTTTTGTGTTTATATTTGATTCCTTATGTATTCTTAA
ATGTACAATATGTTTCTTCTTTTGTAACAGCTTCATTTATGCTGCTAATACCGTTTTCTTTGGTTTATCAATTTATGACA
AATAAAATTTATAATGTAGATTTTATTTTGAGTAGATTAAAATATTATGGTTTTTTAGCATTAACACCTACAATTATTTT
AATTGTTACATTTGAGTTATTGAGAAGGCCAGAGGAAGACTACCATTATATTAGACTTGCAGTTTTGATATATATTATTA
TGGTGGCAGTTTTTTATTATAAGGAAGTACTTGATTTTAGATTTAGATTAAAGCGAGTTTCAGAAAGATTTAATTATCAA
GATAGTATATATAAATTTACACAACTTATTAGAGACTCTTCTTCTGTAAAGCAAGTATTTGGAGAACTGAAAACCACCAT
TCTTGAGGTTACAGTTGTAAGCCGAGCCCATATATATGAAGTTACATTTGATAGGAATATAAAACCATACGAGGAAGTAA
ACTTACATTCATATCATGATACCTATCAAAAACAATTTAGTAAAGTAATATCTGAAATTGGGAAAATCGTTGAATTTAAT
AACGGTTTTGTCATGAAGATAGGTGAGCGCGGGGGTAAATCATTTGTTATACTTTGCTTATCTAAAATGAATACTCCCCG
TCTCACGCTTGAAGAAATTTCTTGGCTTAAAACATTGGCTTTTTATACAAATGTCTCGATTGAAAACGTCATGAAAATTG
AAGAACTGATGAGTCATTTAGAAGAAATAAAACAACAAGAATCAAACCCAGTCTGGCTCAAAAAACTGATGTACACTATC
GAAGAAAAACAACGATCCGACCTGGCGCGTGACCTCCATGACTCCGTTCTTCAGGATTTGATCTCCTTAAAACGGCAATG
CGAGCTGTTTCTTGCTGATTTTAAGAAGGAAGATCCTTGTAAGAATGAGGTGCAGGACAAGCTGGTGCAAATGAATCAGC
AGATGTCTGATGTGATTTTGATGACGAGGGAGACCTGCCATGAATTGCGGCCGCAGCTCTTGTATGATTTGGGATTGGTA
AAGGCGCTGTCAAAGCTTGTTGCGCAGCAGCAGGAAAGCGCGCCGTTTCATATTCGGCTGAATACGGGGAGGTTTACGGC
ATCGCTCGATCTTGATTCTCAGCTGAATTTGTACCGGATTATTCAAGAGTTTTTATCAAATGCCATGAAGCATTCCCAAG
CCGGCGAGGTGCTGATTATGCTGATCAGTTTTCAAAATAAAATTGTTCTTCATTATGAGGATGACGGCGTTGGCTTTGAT
AAGGAAAAATTGAATGAACAATCGATGAGTATGGGGCTTTCGGGTATTAAAGAGCGGGTTCGTGCGTTAGACGGGCACCT
GCGGATCGATACAAGCGTAGGAAATGGATTGCGAGCCGATATTGAAATGGAATTGTAA

Domains

Predicted by InterproScan.

Histidine kinase (HisKA_3)

(565-634)

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(675-758)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

55.642

100

0.561