Detailed information NTG0808333

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: P3T49_RS02535
• Genome accession: NZ_CP120723
• Coordinates: 494324..495472 (+)
• Length: 382 a.a.
• NCBI ID: WP_004430265.1
• Uniprot ID: -
• Organism: Bacillus atrophaeus strain NX-12
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 489324..500472

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
P3T49_RS02515	-	489640..490320 (-)	681	WP_277714326.1	ABC transporter ATP-binding protein	-
P3T49_RS02520	-	490338..491822 (-)	1485	WP_277714327.1	ABC transporter permease	-
P3T49_RS02525	-	492036..492722 (+)	687	WP_106045683.1	response regulator transcription factor	-
P3T49_RS02530	-	492709..494130 (+)	1422	WP_277714328.1	sensor histidine kinase	-
P3T49_RS02535	rapC	494324..495472 (+)	1149	WP_004430265.1	tetratricopeptide repeat protein	Regulator
P3T49_RS02540	phrC	495456..495575 (+)	120	WP_004430266.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
P3T49_RS02545	-	495709..495816 (-)	108	WP_106273028.1	YjcZ family sporulation protein	-
P3T49_RS02550	-	496020..496103 (-)	84	WP_370499808.1	YjcZ family sporulation protein	-
P3T49_RS02555	-	496234..497598 (-)	1365	WP_277714329.1	aspartate kinase	-
P3T49_RS02560	ceuB	498030..498980 (+)	951	WP_010789705.1	ABC transporter permease	Machinery gene
P3T49_RS02565	-	498973..499920 (+)	948	WP_106045687.1	iron chelate uptake ABC transporter family permease subunit	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45756.03 Da
• Isoelectric Point: 4.8173

>NTDB_id=808333 P3T49_RS02535 WP_004430265.1 494324..495472(+) (rapC) [Bacillus atrophaeus strain NX-12]
MKSEVIPSSAVGQKINEWYKYIRTFSVPDAEILKAEIEREIEHMEDDPNLLLYFSLMEFRHQLMLDYLEPLEKLKIEDQP
SLSELLRNIDSNQADLKGLLDYYVNFFRGMHEFDKREFISAITYYKQAEKRLSFVADHIERAEFYFKVAEAYYYMKQTYF
SLIHIKNAYEIYAEQETYNVRIIQCHFVFGVNLMDERRFEQAARHFELALHMAESENKAQLVGRALYNIGLCYYNQDLLE
PAIDYFERAVSIFESNAIIKSLPQAYFLITQIYYKCKNNSKAVEYHSRGYEYAKETDDIDYMVKFEFLKTLYQAQPDEQG
IEKCFYYLKNKNMYADIEDLALVVAKYYYEQKNFEMSSSYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=808333 P3T49_RS02535 WP_004430265.1 494324..495472(+) (rapC) [Bacillus atrophaeus strain NX-12]
ATGAAGAGCGAGGTGATTCCTTCTTCAGCAGTCGGTCAAAAAATTAACGAGTGGTATAAGTATATTCGTACGTTCAGTGT
ACCGGACGCCGAAATTCTAAAAGCCGAGATTGAACGGGAAATTGAACATATGGAAGACGATCCGAACTTGCTGCTATATT
TCTCATTAATGGAATTCCGCCACCAGCTGATGCTTGATTATCTTGAGCCGTTAGAAAAATTAAAAATAGAGGACCAGCCG
AGCTTGTCAGAATTACTGCGCAACATTGACAGCAATCAGGCTGATTTAAAAGGGCTGCTTGATTATTATGTAAACTTTTT
TCGGGGGATGCACGAATTTGATAAGAGAGAATTCATTTCAGCCATCACCTATTACAAACAGGCTGAAAAAAGACTTTCCT
TTGTAGCGGATCATATTGAAAGAGCCGAGTTCTATTTTAAAGTGGCCGAAGCTTATTACTATATGAAACAGACGTATTTC
TCACTGATCCATATCAAAAATGCCTACGAAATATATGCTGAGCAAGAAACATATAATGTGAGAATTATCCAGTGCCATTT
TGTTTTCGGAGTAAATTTGATGGATGAAAGGCGTTTCGAACAAGCCGCGCGCCATTTTGAACTCGCATTACATATGGCGG
AATCAGAAAATAAAGCACAATTGGTCGGAAGAGCGCTTTATAATATTGGGTTGTGTTATTACAACCAAGATCTTCTTGAG
CCTGCCATTGACTATTTTGAAAGAGCGGTTTCTATATTCGAAAGCAACGCCATCATTAAATCCCTTCCTCAGGCATATTT
TCTGATCACGCAGATTTATTATAAATGTAAAAATAATTCTAAAGCAGTGGAATATCACAGCAGGGGTTATGAATATGCTA
AAGAAACAGATGATATTGACTACATGGTGAAATTTGAATTTTTAAAAACTCTATATCAAGCCCAGCCGGATGAACAAGGA
ATCGAAAAATGCTTTTATTACCTAAAAAATAAAAATATGTATGCTGATATAGAGGATTTAGCACTAGTAGTAGCTAAATA
TTACTATGAACAAAAAAACTTCGAAATGTCATCTTCCTACTTTCTCAAAGTAGAAGAGGCCAGAAAACAAATACAAAGGA
GTGAAGGTTTATATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_1) (224-256)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	85.079	100	0.851
rapF	Bacillus subtilis subsp. subtilis str. 168	57.368	99.476	0.571