Detailed information NTG0808178

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: P0M29_RS10255
• Genome accession: NZ_CP120711
• Coordinates: 2009116..2010279 (-)
• Length: 387 a.a.
• NCBI ID: WP_103042075.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain 12Y
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 2004116..2015279

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
P0M29_RS10225 (P0M29_10225)	-	2004381..2004800 (-)	420	WP_014419009.1	TIGR03826 family flagellar region protein	-
P0M29_RS10230 (P0M29_10230)	comFC	2004874..2005563 (-)	690	WP_199449054.1	ComF family protein	Machinery gene
P0M29_RS10235 (P0M29_10235)	-	2005569..2005853 (-)	285	WP_003151389.1	competence protein ComFB	-
P0M29_RS10240 (P0M29_10240)	comFA	2005911..2007296 (-)	1386	WP_029972824.1	DEAD/DEAH box helicase	Machinery gene
P0M29_RS10245 (P0M29_10245)	-	2007404..2008252 (-)	849	WP_003151387.1	DegV family protein	-
P0M29_RS10250 (P0M29_10250)	degU	2008350..2009039 (-)	690	WP_103042074.1	two-component system response regulator DegU	Regulator
P0M29_RS10255 (P0M29_10255)	degS	2009116..2010279 (-)	1164	WP_103042075.1	two-component sensor histidine kinase DegS	Regulator
P0M29_RS10260 (P0M29_10260)	-	2010502..2011149 (+)	648	WP_007614107.1	YigZ family protein	-
P0M29_RS10265 (P0M29_10265)	-	2011154..2012368 (+)	1215	WP_014419013.1	LCP family protein	-
P0M29_RS10270 (P0M29_10270)	-	2012467..2013543 (-)	1077	WP_003151382.1	MraY family glycosyltransferase	-
P0M29_RS10275 (P0M29_10275)	-	2013676..2014872 (-)	1197	WP_029972825.1	glycosyltransferase	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 44998.74 Da
• Isoelectric Point: 6.8616

>NTDB_id=808178 P0M29_RS10255 WP_103042075.1 2009116..2010279(-) (degS) [Bacillus velezensis strain 12Y]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDPRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENQRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=808178 P0M29_RS10255 WP_103042075.1 2009116..2010279(-) (degS) [Bacillus velezensis strain 12Y]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGTAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTCGAAGAACTCAAACAGATCAAACAGCAGG
TCTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAACAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTAGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCGTTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCCTCGCCAAGTGGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGTTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAAATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTGCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGCATCGGAGACACGGAGAACCAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAGCATTCAGAATCAGAGGAAATTACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTTATCATTAAGGACAACGGAAAAGGTTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Histidine kinase (HisKA_3) (180-248)

• Sensor protein DegS (DegS) (12-170)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.325	99.483	0.948