Detailed information    

insolico Bioinformatically predicted

Overview


Name   comQ   Type   Regulator
Locus tag   P6S76_RS14410 Genome accession   NZ_CP120641
Coordinates   2988081..2989019 (-) Length   312 a.a.
NCBI ID   WP_020954300.1    Uniprot ID   -
Organism   Bacillus velezensis strain YL2021     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context


Location: 2983081..2994019
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P6S76_RS14375 - 2983287..2983763 (+) 477 WP_007408672.1 Na+/H+ antiporter subunit E -
  P6S76_RS14380 - 2983763..2984047 (+) 285 WP_007408673.1 Na(+)/H(+) antiporter subunit F1 -
  P6S76_RS14385 mnhG 2984031..2984405 (+) 375 WP_003152056.1 monovalent cation/H(+) antiporter subunit G -
  P6S76_RS14390 - 2984445..2984828 (-) 384 WP_007408674.1 hotdog fold thioesterase -
  P6S76_RS14395 comA 2984850..2985494 (-) 645 WP_003152052.1 response regulator transcription factor Regulator
  P6S76_RS14400 - 2985575..2987885 (-) 2311 Protein_2771 histidine kinase -
  P6S76_RS14405 comX 2987905..2988081 (-) 177 WP_007408675.1 competence pheromone ComX -
  P6S76_RS14410 comQ 2988081..2989019 (-) 939 WP_020954300.1 polyprenyl synthetase family protein Regulator
  P6S76_RS14415 degQ 2989150..2989290 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  P6S76_RS14420 - 2989756..2990097 (+) 342 WP_007408677.1 hypothetical protein -
  P6S76_RS14425 - 2990104..2991327 (-) 1224 WP_007408678.1 EAL and HDOD domain-containing protein -
  P6S76_RS14430 - 2991457..2992923 (-) 1467 WP_020954301.1 nicotinate phosphoribosyltransferase -
  P6S76_RS14435 - 2992941..2993492 (-) 552 WP_003152033.1 isochorismatase family cysteine hydrolase -
  P6S76_RS14440 - 2993589..2993987 (-) 399 WP_003152031.1 DUF1694 domain-containing protein -

Sequence


Protein


Download         Length: 312 a.a.        Molecular weight: 35893.29 Da        Isoelectric Point: 6.3951

>NTDB_id=807431 P6S76_RS14410 WP_020954300.1 2988081..2989019(-) (comQ) [Bacillus velezensis strain YL2021]
MKTIIEQMCLDANQIKNKMKSIIEQNIFNQHLLQLLLGFVESRKYLTFAESALLHYEVFGGRDFKTAEKLAAGIEILTLS
ADIIDDLEDEDNKQALWMKIDRSEALSAAFSLYTAGLQGINSINMNPFILSYILKYTQDAMQGQHDDIINKPEKEDESLE
VIRLKCGSLFALSNVAGTMLATGKYNETVETYSYYKGMFEQIYSDYLALFSSKRSDILKDKHTLINLYLKRLFNEPSEKL
VRMFSHRETHLKFISDKNNFIQTLTDAGVTQYVSVLHQLYKQKCENAIEKLNLETSKIDKLKKYVVNRGIEV

Nucleotide


Download         Length: 939 bp        

>NTDB_id=807431 P6S76_RS14410 WP_020954300.1 2988081..2989019(-) (comQ) [Bacillus velezensis strain YL2021]
GTGAAGACAATTATTGAGCAAATGTGTTTAGATGCCAACCAAATCAAGAATAAAATGAAGAGTATAATAGAGCAAAACAT
ATTTAATCAACATTTACTACAGCTTCTTCTTGGGTTTGTTGAATCCAGAAAATATTTAACCTTTGCTGAATCTGCTTTAT
TGCATTATGAAGTTTTTGGCGGAAGGGATTTTAAGACTGCTGAGAAACTTGCGGCGGGAATTGAAATTCTTACGCTTTCC
GCCGATATTATTGATGATCTTGAAGATGAAGATAACAAACAAGCTCTTTGGATGAAGATAGACCGTTCAGAAGCTTTAAG
CGCAGCTTTTTCATTATACACAGCAGGGCTGCAGGGGATTAATTCAATTAACATGAATCCTTTTATTCTTTCTTACATAC
TGAAATATACACAAGACGCTATGCAAGGACAACACGATGATATAATCAATAAGCCAGAGAAAGAAGATGAAAGTTTAGAG
GTCATTAGATTAAAATGCGGGAGTCTATTCGCTCTATCCAATGTGGCAGGTACTATGTTAGCAACTGGAAAGTATAATGA
AACTGTTGAAACGTATTCCTATTACAAAGGAATGTTTGAACAGATATATAGTGATTATCTGGCTCTTTTCAGCTCTAAAC
GCAGTGATATTTTAAAAGATAAACACACGTTAATCAACTTGTACCTTAAGAGGCTGTTTAACGAGCCTTCTGAAAAATTG
GTTCGTATGTTTTCTCATAGAGAAACACACCTTAAGTTTATATCTGATAAAAACAATTTTATTCAGACATTAACTGATGC
AGGTGTTACTCAGTATGTTTCAGTTTTACACCAATTGTATAAGCAAAAATGTGAAAATGCTATAGAGAAACTAAATCTTG
AAACCAGTAAAATAGATAAATTGAAAAAATATGTAGTTAATAGGGGGATTGAAGTATAA

Domains


Predicted by InterproScan.

(53-247)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

62.456

91.346

0.571