Detailed information    

insolico Bioinformatically predicted

Overview

Name   comA   Type   Regulator
Locus tag   P6S76_RS14395 Genome accession   NZ_CP120641
Coordinates   2984850..2985494 (-) Length   214 a.a.
NCBI ID   WP_003152052.1    Uniprot ID   A3KLB8
Organism   Bacillus velezensis strain YL2021     
Function   promoting transcription of comS (predicted from homology)   
Competence regulation

Genomic Context

Location: 2979850..2990494
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P6S76_RS14360 - 2981035..2981466 (+) 432 WP_007408670.1 Na(+)/H(+) antiporter subunit B -
  P6S76_RS14365 - 2981466..2981807 (+) 342 WP_003152063.1 Na(+)/H(+) antiporter subunit C -
  P6S76_RS14370 - 2981800..2983281 (+) 1482 WP_007408671.1 Na+/H+ antiporter subunit D -
  P6S76_RS14375 - 2983287..2983763 (+) 477 WP_007408672.1 Na+/H+ antiporter subunit E -
  P6S76_RS14380 - 2983763..2984047 (+) 285 WP_007408673.1 Na(+)/H(+) antiporter subunit F1 -
  P6S76_RS14385 mnhG 2984031..2984405 (+) 375 WP_003152056.1 monovalent cation/H(+) antiporter subunit G -
  P6S76_RS14390 - 2984445..2984828 (-) 384 WP_007408674.1 hotdog fold thioesterase -
  P6S76_RS14395 comA 2984850..2985494 (-) 645 WP_003152052.1 response regulator transcription factor Regulator
  P6S76_RS14400 - 2985575..2987885 (-) 2311 Protein_2771 histidine kinase -
  P6S76_RS14405 comX 2987905..2988081 (-) 177 WP_007408675.1 competence pheromone ComX -
  P6S76_RS14410 comQ 2988081..2989019 (-) 939 WP_020954300.1 polyprenyl synthetase family protein Regulator
  P6S76_RS14415 degQ 2989150..2989290 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  P6S76_RS14420 - 2989756..2990097 (+) 342 WP_007408677.1 hypothetical protein -

Sequence

Protein


Download         Length: 214 a.a.        Molecular weight: 24271.68 Da        Isoelectric Point: 4.9953

>NTDB_id=807430 P6S76_RS14395 WP_003152052.1 2984850..2985494(-) (comA) [Bacillus velezensis strain YL2021]
MKKILVIDDHPAVMEGTKTILETDTNLSVDCLSPDASEQFVLRHDFSAYDLILMDLNLGDDISGIELSKKILKENPLCKI
IVYTGYEVEDYFEESIRAGLHGAISKTESKEKIMQYIYHVLNGQILVDFSYFKQLMTQQKTKTSSSPQSEQDRLTPRERH
ILQEVEKGLTNQEIADALHLSKRSIEYSLTSIFNKLNVGSRTEAVLIAKSDNVL

Nucleotide


Download         Length: 645 bp        

>NTDB_id=807430 P6S76_RS14395 WP_003152052.1 2984850..2985494(-) (comA) [Bacillus velezensis strain YL2021]
ATGAAAAAGATACTAGTGATTGATGATCATCCGGCTGTCATGGAGGGCACCAAGACGATTCTGGAAACGGACACGAATCT
TTCTGTCGATTGCCTCAGTCCTGATGCCAGTGAACAATTCGTTCTCCGGCATGATTTTTCAGCTTACGATCTCATATTAA
TGGATTTAAATCTGGGTGATGACATCAGCGGCATAGAGCTTTCTAAGAAAATCTTAAAAGAGAATCCTCTCTGTAAAATC
ATTGTCTACACAGGCTATGAGGTTGAAGATTATTTTGAAGAATCCATCCGCGCGGGCCTGCATGGCGCCATCAGCAAAAC
CGAATCTAAAGAGAAAATCATGCAATACATATATCACGTGCTCAACGGACAGATTTTAGTTGATTTCTCCTATTTCAAAC
AGCTGATGACCCAGCAAAAAACAAAAACGTCTTCTTCCCCTCAAAGTGAGCAGGATCGGTTAACCCCGAGAGAGCGCCAT
ATTCTCCAAGAGGTCGAAAAAGGTTTGACCAATCAGGAAATCGCAGATGCGCTTCACTTAAGCAAGCGGTCAATTGAATA
CAGCCTGACATCCATTTTTAACAAGCTGAATGTCGGCTCCCGAACTGAAGCGGTGCTGATCGCCAAGTCAGATAACGTAC
TATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(4-117)

Bacterial regulatory proteins, luxR family (GerE)

(153-208)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A3KLB8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA Bacillus subtilis subsp. subtilis str. 168

86.449

100

0.864