Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrR   Type   Regulator
Locus tag   QN337_RS04945 Genome accession   NZ_CP134688
Coordinates   983434..983874 (-) Length   146 a.a.
NCBI ID   WP_000431168.1    Uniprot ID   R4Z9I5
Organism   Streptococcus agalactiae strain MA07     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 978434..988874
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QN337_RS04930 (QN337_04925) - 979092..979718 (-) 627 WP_000449636.1 GTP pyrophosphokinase family protein -
  QN337_RS04935 (QN337_04930) rcrQ 979826..981580 (-) 1755 WP_000851083.1 ABC transporter ATP-binding protein Regulator
  QN337_RS04940 (QN337_04935) rcrP 981570..983387 (-) 1818 WP_000481819.1 ABC transporter ATP-binding protein Regulator
  QN337_RS04945 (QN337_04940) rcrR 983434..983874 (-) 441 WP_000431168.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  QN337_RS04950 (QN337_04945) - 984143..986215 (+) 2073 WP_017645599.1 surface-anchored 5'-nucleotidase -
  QN337_RS04955 (QN337_04950) - 986252..986662 (-) 411 WP_000594935.1 peptide deformylase -
  QN337_RS04960 (QN337_04955) gdhA 986732..988081 (-) 1350 WP_000200433.1 NADP-specific glutamate dehydrogenase -
  QN337_RS04965 (QN337_04960) - 988249..988758 (+) 510 WP_000870956.1 HdeD family acid-resistance protein -

Sequence

Protein


Download         Length: 146 a.a.        Molecular weight: 16968.84 Da        Isoelectric Point: 9.8384

>NTDB_id=807233 QN337_RS04945 WP_000431168.1 983434..983874(-) (rcrR) [Streptococcus agalactiae strain MA07]
MENPLQKARILVNQLEKYLDRYAKEYDVEHLAGPQGHLVMHLYKHPDKDMSIKDAEEILHISKSVASNLVKRMEKNGFIA
IVPSKTDKRVKYLYLTHLGKQKATQFEIFLEKLHSTMLAGITKEEIRTTKKVIRTLAKNMAMEDFD

Nucleotide


Download         Length: 441 bp        

>NTDB_id=807233 QN337_RS04945 WP_000431168.1 983434..983874(-) (rcrR) [Streptococcus agalactiae strain MA07]
ATGGAGAATCCTCTTCAAAAAGCACGAATACTTGTTAATCAACTTGAAAAGTATTTAGATCGTTATGCAAAAGAGTATGA
TGTTGAACATTTAGCGGGTCCACAAGGACACTTAGTGATGCATCTCTATAAACATCCTGACAAGGATATGTCTATAAAAG
ATGCTGAAGAAATTTTACACATCTCTAAGTCTGTAGCTTCTAATTTGGTAAAACGGATGGAAAAAAATGGATTTATTGCG
ATTGTTCCATCTAAGACAGATAAGCGTGTGAAATACCTTTATTTGACTCATCTAGGTAAACAAAAGGCTACACAATTTGA
AATTTTCTTAGAAAAATTGCACAGTACCATGTTAGCAGGTATTACTAAAGAAGAGATACGTACTACCAAAAAGGTTATTA
GAACATTAGCTAAAAATATGGCGATGGAAGATTTTGATTAA

Domains

Predicted by InterProScan.

MarR family (MarR_2)

(33-89)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  PDB 7DVS

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrR Streptococcus mutans UA159

42.857

95.89

0.411