Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   P5657_RS08205 Genome accession   NZ_CP120621
Coordinates   1594575..1596872 (+) Length   765 a.a.
NCBI ID   WP_212082410.1    Uniprot ID   -
Organism   Bacillus subtilis strain DSM 13019     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 1589575..1601872
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P5657_RS08175 (P5657_08175) pdeH 1591171..1592400 (+) 1230 WP_277710388.1 cyclic di-GMP phosphodiesterase -
  P5657_RS08180 (P5657_08180) - 1592376..1592744 (-) 369 WP_038828672.1 hypothetical protein -
  P5657_RS08185 (P5657_08185) - 1592859..1592984 (-) 126 WP_120028613.1 hypothetical protein -
  P5657_RS08190 (P5657_08190) degQ 1593206..1593346 (+) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  P5657_RS08195 (P5657_08195) - 1593531..1594391 (+) 861 WP_032677058.1 polyprenyl synthetase family protein -
  P5657_RS08200 (P5657_08200) comX 1594406..1594567 (+) 162 WP_049140565.1 competence pheromone ComX -
  P5657_RS08205 (P5657_08205) comP 1594575..1596872 (+) 2298 WP_212082410.1 histidine kinase Regulator
  P5657_RS08210 (P5657_08210) comA 1596953..1597597 (+) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  P5657_RS08215 (P5657_08215) yuxO 1597616..1597996 (+) 381 WP_017695528.1 hotdog fold thioesterase -
  P5657_RS08220 (P5657_08220) mnhG 1598037..1598411 (-) 375 WP_003244302.1 monovalent cation/H(+) antiporter subunit G -
  P5657_RS08225 (P5657_08225) mrpF 1598395..1598679 (-) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  P5657_RS08230 (P5657_08230) mrpE 1598679..1599155 (-) 477 WP_003228815.1 Na+/H+ antiporter subunit E -
  P5657_RS08235 (P5657_08235) mrpD 1599161..1600642 (-) 1482 WP_029725869.1 Na+/H+ antiporter subunit D -
  P5657_RS08240 (P5657_08240) mrpC 1600635..1600976 (-) 342 WP_003220730.1 Na(+)/H(+) antiporter subunit C -
  P5657_RS08245 (P5657_08245) mrpB 1600976..1601407 (-) 432 WP_003228819.1 Na(+)/H(+) antiporter subunit B -

Sequence


Protein


Download         Length: 765 a.a.        Molecular weight: 88394.71 Da        Isoelectric Point: 8.1785

>NTDB_id=807040 P5657_RS08205 WP_212082410.1 1594575..1596872(+) (comP) [Bacillus subtilis strain DSM 13019]
MKSRNNKISVVLVVLSLIYVIYLTYISNNNLLVGATVSKGKNGDIVITNVDEFSMASYSGIEKGDIVKRINNKKINTNEI
KMNKLKNVSSMIVERNGHNLELKMTLFNDKNFTTYLIPLIFYIVCLFCCFFILKINESKNLLSAVVLIIFLLSASIAFIS
AGGSAKGDMLSRLIMVVTLISVPLNYLLFLYQYFKELGTKLFNKKVFILYLIPVINVVCEIFRSHLFFRDYVPKLNLLAF
FFLFIIVGVYFSIILIKNKDTEQAHIIKVLTIINIFSFSPFLCLYLIPYVFLNAHYVSSFLAASFMLLIPFSLVFQFMTN
KIYNVDFILSRLRYYGFLALTPTIILISTIELISSPDSDFYSVKLTFLIYIIMLAVFYYKEVLDFRFRLKRVSEKFNYQD
SIYKFTQMIRDSTSLSQVFEELKNTILEVSLVSRAHVYEVSADGSIKLYDDENVNSFEKVYEKEFRKVTSEIGKIVEFNK
GFVMKIGERGGKSFVILCLSKMNTPRLTLEELSWLKTLAFYTNVSIENVMKIEELMSHLEEIKQQESNPVWLKKLMYTIE
EKQRSDLARDLHDSVLQDLISLKRQCELFLADFKKDDDPCREEVQDKLVQMNEQMSDVISMTRETCHELRPQLLYDLGLV
KALSKLVAQQQERVPFHIRLNTGRFTASLDLDSQLNLYRIIQEFLSNAVKHSQATDVLIMLISIQNKIVLHYEDDGVGFD
QEKNTEHSMSMGLSGIKERVRALDGRLRIETSEGKGFKADIEIEL

Nucleotide


Download         Length: 2298 bp        

>NTDB_id=807040 P5657_RS08205 WP_212082410.1 1594575..1596872(+) (comP) [Bacillus subtilis strain DSM 13019]
ATGAAGTCTAGAAATAACAAAATTTCTGTAGTGTTAGTTGTATTAAGTTTGATTTATGTTATTTATTTGACTTATATTAG
TAATAATAATTTATTAGTAGGGGCAACTGTCTCTAAAGGAAAAAATGGCGATATTGTAATTACCAATGTAGATGAATTTT
CAATGGCTTCATACAGCGGTATAGAAAAAGGAGATATCGTAAAGCGTATTAATAATAAAAAGATAAACACAAACGAAATA
AAAATGAACAAACTAAAAAATGTAAGTTCGATGATTGTGGAAAGAAATGGACATAATCTTGAGTTGAAAATGACCTTATT
TAATGATAAAAATTTCACTACTTACTTAATACCGTTAATATTTTATATTGTTTGTTTATTTTGTTGCTTTTTTATATTAA
AAATAAATGAATCAAAGAACCTTCTCTCAGCTGTAGTTTTAATTATCTTTCTGTTGTCTGCCTCTATTGCATTTATAAGC
GCTGGAGGGTCTGCTAAGGGAGATATGCTGAGCAGGCTTATAATGGTGGTAACATTAATATCTGTTCCGCTAAACTATCT
TCTCTTTCTTTATCAATATTTCAAAGAATTAGGAACCAAATTATTTAATAAGAAAGTTTTTATTTTATATTTGATTCCGG
TCATAAATGTAGTTTGTGAAATTTTTCGTTCACATCTTTTCTTTCGAGATTATGTTCCTAAATTAAATTTACTTGCTTTT
TTCTTTTTATTTATTATAGTAGGGGTTTATTTTAGTATCATACTAATTAAAAATAAAGACACTGAACAAGCACATATTAT
TAAGGTTCTCACTATCATTAATATCTTTTCTTTTTCGCCTTTTCTGTGTTTATATTTGATACCTTACGTGTTTTTAAATG
CACATTATGTTTCTTCTTTTTTAGCGGCTTCATTTATGCTGCTGATACCATTCTCATTGGTATTTCAATTCATGACAAAT
AAAATCTATAATGTAGATTTTATTTTAAGCAGATTAAGGTACTATGGCTTTTTAGCTCTAACGCCAACAATTATTCTAAT
CTCTACAATTGAATTAATTAGTAGTCCTGATAGTGATTTTTATAGTGTTAAACTAACCTTTTTAATTTATATTATCATGT
TGGCGGTCTTTTATTATAAAGAAGTACTTGATTTCAGATTTAGATTAAAAAGGGTCTCGGAAAAATTCAATTATCAAGAC
AGTATATATAAATTCACGCAGATGATAAGAGACTCTACTTCCCTGTCTCAAGTATTTGAAGAACTGAAAAATACTATACT
TGAGGTTTCTCTTGTTAGCCGAGCACATGTATATGAAGTTTCAGCTGACGGAAGTATTAAACTATATGATGATGAGAACG
TAAATTCATTTGAAAAAGTCTATGAAAAAGAATTTAGAAAAGTAACATCCGAAATAGGGAAAATCGTTGAATTTAATAAA
GGTTTTGTCATGAAGATTGGTGAACGCGGTGGTAAATCATTTGTGATCCTTTGTTTATCTAAAATGAATACGCCTCGTCT
CACACTCGAAGAACTTTCTTGGCTGAAAACTTTGGCTTTTTATACAAACGTATCGATCGAAAACGTCATGAAAATCGAAG
AACTGATGAGTCATTTAGAAGAAATAAAACAACAAGAATCCAACCCCGTATGGCTCAAAAAACTCATGTATACGATCGAG
GAAAAACAACGCTCTGATCTCGCCCGCGATCTCCACGATTCCGTTCTTCAGGATTTGATTTCCTTAAAACGCCAGTGTGA
GCTGTTTTTGGCTGATTTTAAGAAGGATGATGATCCATGCCGTGAAGAGGTGCAGGACAAGCTCGTACAGATGAATGAGC
AGATGTCTGATGTGATTTCGATGACGAGGGAGACGTGTCATGAATTGCGGCCGCAGCTTCTGTATGATCTTGGGCTGGTG
AAGGCGCTGTCGAAGCTTGTGGCGCAGCAGCAGGAGCGGGTGCCGTTTCATATCCGTTTAAATACGGGCAGATTTACGGC
TTCGCTTGATCTGGATTCGCAGCTGAATTTGTACCGGATCATTCAAGAGTTTCTGTCTAATGCGGTCAAGCACTCTCAGG
CGACGGATGTGCTGATTATGCTCATCAGTATTCAAAACAAAATCGTTCTTCATTATGAGGATGATGGCGTAGGGTTTGAT
CAGGAAAAGAATACTGAGCATTCCATGAGCATGGGGCTTTCTGGCATTAAGGAGAGAGTCAGGGCTTTAGATGGGCGCCT
TCGGATTGAAACAAGTGAAGGAAAGGGCTTTAAGGCTGATATTGAAATCGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

58.679

100

0.592