Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   P5638_RS16480 Genome accession   NZ_CP120599
Coordinates   3211927..3212124 (-) Length   65 a.a.
NCBI ID   WP_024425054.1    Uniprot ID   A0AAX0Z5U3
Organism   Bacillus safensis strain PRO114     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 3206927..3217124
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P5638_RS16455 (P5638_16455) - 3207299..3208279 (-) 981 WP_277722136.1 ABC transporter ATP-binding protein -
  P5638_RS16460 (P5638_16460) - 3208429..3209232 (-) 804 WP_024425050.1 DUF2268 domain-containing protein -
  P5638_RS16465 (P5638_16465) fabF 3209310..3210551 (-) 1242 WP_277722137.1 beta-ketoacyl-ACP synthase II -
  P5638_RS16470 (P5638_16470) - 3210573..3211511 (-) 939 WP_024425052.1 beta-ketoacyl-ACP synthase III -
  P5638_RS16475 (P5638_16475) - 3211683..3211916 (+) 234 WP_024426489.1 hypothetical protein -
  P5638_RS16480 (P5638_16480) comZ 3211927..3212124 (-) 198 WP_024425054.1 ComZ family protein Regulator
  P5638_RS16485 (P5638_16485) med 3212137..3213099 (-) 963 WP_024425055.1 BMP family ABC transporter substrate-binding protein Regulator
  P5638_RS16490 (P5638_16490) - 3213191..3213766 (-) 576 WP_277722140.1 nad binding enzyme -
  P5638_RS16495 (P5638_16495) - 3213840..3214580 (-) 741 WP_024425057.1 hypothetical protein -
  P5638_RS16500 (P5638_16500) - 3214793..3214987 (+) 195 WP_003211779.1 YjzD family protein -
  P5638_RS16505 (P5638_16505) - 3215098..3216363 (-) 1266 WP_277722142.1 MFS transporter -
  P5638_RS16510 (P5638_16510) - 3216527..3216706 (-) 180 WP_008348517.1 YjzC family protein -

Sequence

Protein


Download         Length: 65 a.a.        Molecular weight: 7405.45 Da        Isoelectric Point: 4.1652

>NTDB_id=806529 P5638_RS16480 WP_024425054.1 3211927..3212124(-) (comZ) [Bacillus safensis strain PRO114]
MQHEKSMEFLQIAMKYFPQAKEELDKAGIQLEPEALQPLLTLFTSVMQEAYELGKADAESEKATE

Nucleotide


Download         Length: 198 bp        

>NTDB_id=806529 P5638_RS16480 WP_024425054.1 3211927..3212124(-) (comZ) [Bacillus safensis strain PRO114]
ATGCAGCACGAAAAATCGATGGAATTTTTACAAATTGCCATGAAGTATTTTCCGCAGGCGAAGGAAGAGTTAGATAAAGC
AGGGATTCAGCTTGAGCCTGAAGCACTTCAGCCGCTTCTAACATTATTTACATCTGTCATGCAAGAAGCATACGAGCTTG
GAAAAGCAGATGCAGAATCAGAAAAAGCCACAGAATAG

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

72.131

93.846

0.677