Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   P5638_RS15275 Genome accession   NZ_CP120599
Coordinates   2988752..2989213 (+) Length   153 a.a.
NCBI ID   WP_008356877.1    Uniprot ID   -
Organism   Bacillus safensis strain PRO114     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 2983752..2994213
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P5638_RS15250 (P5638_15250) - 2984169..2984666 (+) 498 WP_034623332.1 L,D-transpeptidase family protein -
  P5638_RS15255 (P5638_15255) - 2984740..2986017 (+) 1278 WP_024426859.1 MFS transporter -
  P5638_RS15260 (P5638_15260) - 2986278..2986493 (+) 216 WP_024424712.1 hypothetical protein -
  P5638_RS15265 (P5638_15265) - 2986646..2987542 (-) 897 WP_024426858.1 EamA family transporter -
  P5638_RS15270 (P5638_15270) - 2987656..2988573 (+) 918 WP_024426857.1 AraC family transcriptional regulator -
  P5638_RS15275 (P5638_15275) kre 2988752..2989213 (+) 462 WP_008356877.1 YkyB family protein Regulator
  P5638_RS15280 (P5638_15280) - 2989251..2990159 (-) 909 WP_024424709.1 chemotaxis protein -
  P5638_RS15285 (P5638_15285) - 2990233..2991543 (-) 1311 WP_277722030.1 MFS transporter -
  P5638_RS19180 - 2991668..2991910 (-) 243 WP_338423282.1 RDD family protein -
  P5638_RS15290 (P5638_15290) - 2991829..2992206 (-) 378 Protein_2969 RDD family protein -
  P5638_RS15295 (P5638_15295) - 2992508..2992660 (+) 153 WP_162842519.1 hypothetical protein -
  P5638_RS15300 (P5638_15300) - 2992725..2993609 (-) 885 WP_025092345.1 cation diffusion facilitator family transporter -

Sequence

Protein


Download         Length: 153 a.a.        Molecular weight: 17711.30 Da        Isoelectric Point: 10.2452

>NTDB_id=806522 P5638_RS15275 WP_008356877.1 2988752..2989213(+) (kre) [Bacillus safensis strain PRO114]
MDDYAHTKDIEPTAENIAKAIYTVNRHAKTAPNPKFLYLLKKRALQKLLQEGKGRKVGLHFSNNPKYSQQQSDVLIEIGD
YYFHLPPTKEDFEFLPHLGNLNQSYRNPKANMSLNRAKQILQTYVGLKEKPAATKQKSHYTKPVFKRLGESYF

Nucleotide


Download         Length: 462 bp        

>NTDB_id=806522 P5638_RS15275 WP_008356877.1 2988752..2989213(+) (kre) [Bacillus safensis strain PRO114]
ATGGACGATTATGCTCATACTAAAGACATAGAACCTACAGCAGAAAACATCGCAAAAGCCATTTATACTGTTAACCGCCA
TGCTAAAACCGCACCAAACCCCAAGTTTCTTTATCTTTTGAAAAAACGCGCGCTGCAAAAACTATTGCAAGAAGGTAAAG
GAAGAAAAGTGGGCCTACATTTCTCTAACAATCCCAAGTATAGTCAACAACAGTCCGACGTGCTGATTGAAATTGGAGAT
TATTATTTTCACCTGCCACCAACGAAAGAAGACTTCGAATTTTTGCCACACTTAGGAAATTTAAATCAATCATATCGCAA
TCCGAAAGCGAATATGTCATTAAACCGAGCAAAGCAAATACTTCAAACGTATGTCGGTTTAAAAGAAAAACCTGCCGCCA
CAAAACAAAAATCACATTACACAAAGCCCGTCTTCAAACGTCTCGGGGAAAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

75.974

100

0.765