Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   P5638_RS07420 Genome accession   NZ_CP120599
Coordinates   1492978..1495269 (+) Length   763 a.a.
NCBI ID   WP_224426590.1    Uniprot ID   -
Organism   Bacillus safensis strain PRO114     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 1487978..1500269
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P5638_RS07395 (P5638_07395) - 1489474..1490700 (+) 1227 WP_024425947.1 HDOD domain-containing protein -
  P5638_RS07400 (P5638_07400) - 1490736..1491092 (-) 357 WP_277722845.1 inner spore coat protein -
  P5638_RS07405 (P5638_07405) degQ 1491598..1491738 (+) 141 WP_003213123.1 degradation enzyme regulation protein DegQ Regulator
  P5638_RS07410 (P5638_07410) - 1491890..1492813 (+) 924 WP_277722846.1 polyprenyl synthetase family protein -
  P5638_RS07415 (P5638_07415) comX 1492791..1492964 (+) 174 WP_060698182.1 competence pheromone ComX -
  P5638_RS07420 (P5638_07420) comP 1492978..1495269 (+) 2292 WP_224426590.1 ATP-binding protein Regulator
  P5638_RS07425 (P5638_07425) comA 1495350..1495991 (+) 642 WP_024423322.1 response regulator transcription factor Regulator
  P5638_RS07430 (P5638_07430) - 1496015..1496404 (+) 390 WP_024423321.1 hotdog fold thioesterase -
  P5638_RS07435 (P5638_07435) mnhG 1496497..1496871 (-) 375 WP_024423320.1 monovalent cation/H(+) antiporter subunit G -
  P5638_RS07440 (P5638_07440) - 1496855..1497136 (-) 282 WP_024425942.1 Na(+)/H(+) antiporter subunit F1 -
  P5638_RS07445 (P5638_07445) - 1497136..1497615 (-) 480 WP_024425941.1 Na+/H+ antiporter subunit E -
  P5638_RS07450 (P5638_07450) - 1497622..1499100 (-) 1479 WP_277722847.1 Na+/H+ antiporter subunit D -
  P5638_RS07455 (P5638_07455) - 1499093..1499434 (-) 342 WP_024423316.1 Na(+)/H(+) antiporter subunit C -
  P5638_RS07460 (P5638_07460) - 1499434..1499865 (-) 432 WP_024423315.1 Na(+)/H(+) antiporter subunit B -

Sequence


Protein


Download         Length: 763 a.a.        Molecular weight: 87940.20 Da        Isoelectric Point: 6.8150

>NTDB_id=806500 P5638_RS07420 WP_224426590.1 1492978..1495269(+) (comP) [Bacillus safensis strain PRO114]
MQKFYSKLTVILLILSFIYVIYISYINVFNIFVGAVVSVNSDGQLEIEDVVDFTDSYYAGVRKGDIILEVNGNKEPTEEV
RRGYLANVKSLVVDRHGDEIEIENVSLLSQENLFIYLIPIIFYSISLFCIFMILKINKARKKESAYILALFLLAVAVAYV
SSGGSGKGEYISGFIVISTMTCVPPLYMHFMYQYLKELGTEIISWRVLLCLYAVPFINIVLEILFKDMVLAAFNLLSFFA
LAFITIIITLRAAKKLKGTEIGNVLSAFALILISSFSPFMLFFIIPYLFHKYFISPYILASFALLIPFFLVYQFMTNKLY
NVDFFLGRIKYYSLLAITPTIAVVVIFDFIQKPSANFYTMKFTIITYILMLTVFYFKEIIDFRFRLKRFSEKHNYQDSVF
KFTQLIREASSLHQVFYHLKYTILEVLVVNKAFVLEVKADGQVEEIDESTEDSKLWKKYVDQFQELLGEVGKIIALDKGF
MMKIGERGGHSFVICCLSNLRTPKLSRDEISWLKTLAFYTSVSLENVVKIEELMEHLDDLKQREANPAWLKKIMFAMEEK
QRSDLARDLHDSVLQDLISLKRQSEMFLTNFQNNQCPTSIENSLISWNDQMSKVIQTTRETCHELRPQLLYDLGLVKAIS
KLTSQIQEEAPFHIRLNTTRFDKELDIDIDSQLNIYRIVQELLSNALKHSKATQVLVMLICIKDQVVLHYEDDGVGFDAS
HLDQHTMSMGLSGIRERVKALNGKLQIHTAPEKGLKVKIEMEL

Nucleotide


Download         Length: 2292 bp        

>NTDB_id=806500 P5638_RS07420 WP_224426590.1 1492978..1495269(+) (comP) [Bacillus safensis strain PRO114]
ATGCAAAAATTTTACTCGAAATTAACTGTTATTTTACTGATCCTTAGCTTCATTTATGTGATTTATATTTCCTACATCAA
TGTGTTTAATATTTTTGTAGGGGCAGTCGTTTCGGTGAATAGTGACGGACAACTTGAAATAGAGGATGTTGTAGATTTTA
CAGACAGCTATTATGCTGGTGTGAGAAAAGGCGATATCATCCTTGAAGTGAACGGTAATAAAGAACCAACCGAAGAAGTA
AGACGAGGTTATTTAGCGAATGTCAAGAGCTTAGTTGTTGATAGACATGGTGATGAAATAGAAATAGAGAATGTAAGCTT
ATTAAGTCAAGAAAATTTGTTTATTTATTTAATACCTATCATTTTTTATTCGATCAGTCTATTCTGTATATTTATGATTT
TAAAAATCAATAAAGCTAGGAAAAAAGAGTCTGCATATATTCTTGCTCTCTTTTTGCTAGCTGTTGCTGTAGCCTATGTA
AGCTCTGGCGGCTCTGGTAAAGGGGAATATATTAGCGGTTTTATCGTCATTTCTACGATGACTTGTGTACCCCCGTTGTA
TATGCATTTTATGTATCAATATTTAAAGGAATTAGGAACGGAAATTATCAGTTGGCGTGTACTTCTTTGTTTGTATGCCG
TCCCTTTTATAAATATTGTTTTAGAAATTCTGTTTAAAGATATGGTTTTAGCTGCTTTTAACTTACTTTCATTCTTTGCA
CTTGCATTTATTACGATTATTATCACATTAAGGGCTGCTAAAAAGTTGAAAGGGACTGAAATCGGAAATGTCCTTAGTGC
CTTTGCACTTATCTTGATCTCATCATTCAGTCCATTTATGCTATTTTTTATTATTCCTTATTTATTTCATAAATATTTTA
TTTCACCTTATATCCTAGCATCGTTCGCTTTATTGATTCCGTTTTTCTTAGTCTATCAATTTATGACAAATAAATTATAT
AATGTTGATTTCTTTTTGGGGAGAATCAAATATTATAGTCTTTTAGCCATCACACCTACTATAGCGGTAGTCGTTATATT
TGATTTCATTCAGAAGCCAAGTGCTAACTTTTATACAATGAAATTTACGATTATCACGTATATTCTTATGCTCACTGTCT
TCTATTTTAAAGAAATCATCGACTTCCGTTTTCGTCTGAAGCGTTTTTCAGAGAAGCATAATTATCAAGATAGCGTGTTT
AAATTCACGCAGCTCATTCGTGAGGCGTCATCACTTCACCAGGTGTTCTATCATTTAAAATACACCATTTTAGAAGTACT
TGTTGTGAACAAAGCCTTTGTGCTTGAAGTGAAGGCAGATGGACAGGTTGAAGAGATTGATGAATCGACAGAGGACAGTA
AGCTATGGAAAAAGTATGTAGACCAATTTCAAGAATTATTAGGTGAAGTTGGAAAAATCATTGCGCTTGATAAAGGATTC
ATGATGAAAATTGGTGAGCGGGGCGGTCACTCTTTTGTGATTTGCTGTTTATCTAATTTACGGACACCGAAATTGTCGCG
TGATGAGATTTCTTGGCTGAAAACATTAGCTTTTTATACAAGTGTCAGTTTAGAAAATGTCGTTAAAATCGAAGAATTGA
TGGAGCATCTTGACGATTTGAAACAGCGCGAGGCCAATCCTGCCTGGCTGAAGAAAATCATGTTTGCCATGGAAGAAAAG
CAGCGCTCAGATTTAGCGAGGGATCTTCATGATTCCGTACTGCAGGACTTGATATCACTAAAAAGGCAGTCGGAGATGTT
TTTAACGAATTTCCAAAACAACCAATGCCCGACATCTATTGAAAATTCGCTTATCTCATGGAATGATCAAATGTCCAAAG
TGATTCAAACGACGAGAGAAACGTGTCATGAGCTTCGGCCGCAGCTGCTGTATGATTTAGGGTTAGTAAAGGCGATATCG
AAGCTGACTTCTCAAATTCAGGAGGAAGCGCCGTTTCATATTAGGCTGAATACGACACGCTTTGATAAAGAATTGGACAT
TGATATTGATTCACAGCTGAATATTTACCGAATTGTTCAGGAACTGTTATCCAATGCCCTGAAGCATTCAAAAGCCACTC
AAGTGTTAGTGATGCTGATTTGTATTAAAGATCAGGTTGTTCTTCACTATGAGGATGATGGAGTCGGTTTTGATGCAAGT
CATCTTGATCAGCACACAATGAGCATGGGGCTATCGGGAATTAGAGAACGAGTGAAAGCGTTAAATGGAAAGCTTCAAAT
TCACACAGCCCCGGAAAAAGGGCTTAAGGTGAAAATTGAAATGGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

49.357

100

0.503