Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   P5628_RS02075 Genome accession   NZ_CP120577
Coordinates   408447..409397 (+) Length   316 a.a.
NCBI ID   WP_014662773.1    Uniprot ID   A0A292GGZ9
Organism   Bacillus subtilis strain PRO53     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 403447..414397
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P5628_RS02050 (P5628_02050) rapC 404906..406054 (+) 1149 WP_014475800.1 response regulator aspartate phosphatase RapC Regulator
  P5628_RS02055 (P5628_02055) phrC 406038..406160 (+) 123 WP_003224994.1 phosphatase RapC inhibitor PhrC Regulator
  P5628_RS02060 (P5628_02060) yczM 406260..406349 (-) 90 WP_015482794.1 YjcZ family sporulation protein -
  P5628_RS02065 (P5628_02065) yczN 406431..406544 (-) 114 WP_003234495.1 YjcZ family sporulation protein -
  P5628_RS02070 (P5628_02070) thrD 406698..408062 (-) 1365 WP_122895034.1 aspartate kinase -
  P5628_RS02075 (P5628_02075) ceuB 408447..409397 (+) 951 WP_014662773.1 petrobactin ABC transporter permease YclN Machinery gene
  P5628_RS02080 (P5628_02080) yclO 409390..410337 (+) 948 WP_014475805.1 petrobactin ABC transporter permease YclO -
  P5628_RS02085 (P5628_02085) yclP 410331..411089 (+) 759 WP_161621347.1 petrobactin ABC transporter ATP-binding protein YclP -
  P5628_RS02090 (P5628_02090) yclQ 411111..412064 (+) 954 WP_046160056.1 petrobactin ABC transporter substrate-binding protein YclQ -
  P5628_RS02095 (P5628_02095) ycnB 412111..413529 (-) 1419 WP_014478836.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34857.25 Da        Isoelectric Point: 9.9364

>NTDB_id=806276 P5628_RS02075 WP_014662773.1 408447..409397(+) (ceuB) [Bacillus subtilis strain PRO53]
MKLRYLFILLIILAVTSVFIGVEDLSPLDLFDLSKQEASTLFASRLPRLISIVIAGLSMSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLIKMLVAFVFALAGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTLAGMGESFSVNLGLKYKRVVNIGLIIVSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKSSLPHTALLGAVFVLFCDILGRVIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=806276 P5628_RS02075 WP_014662773.1 408447..409397(+) (ceuB) [Bacillus subtilis strain PRO53]
ATGAAGCTACGTTACTTATTTATTCTACTTATCATATTAGCAGTCACATCTGTATTTATCGGTGTAGAAGATCTGTCGCC
GCTTGATCTCTTCGATTTAAGCAAACAAGAGGCGTCAACGCTGTTTGCAAGCCGTTTGCCGCGATTGATCAGCATTGTCA
TCGCGGGATTAAGCATGAGCATCTGCGGTTTGATTATGCAGCAGATCAGCAGAAATAAATTCGTGTCACCGACGACGGCG
GGCACGATGGATTGGGCGAGGCTCGGCATTTTAATTTCCTTGCTGCTGTTTACATCCGCCAGTCCTTTAATCAAAATGCT
GGTCGCGTTTGTCTTTGCCCTTGCAGGAAATTTTCTGTTTATGAAAATCCTTGAAAGAATCAAGTTTAACGACACCATCT
TTATTCCGCTTGTCGGTTTAATGCTCGGGAATATCGTCAGTTCAATCGCGACATTTATCGCATATAAATATGACTTGATC
CAGAATGTGTCATCATGGCTGCAGGGAGACTTCTCTTTAGTCGTGAAAGGAAGATACGAGCTTCTTTATCTGAGTATTCC
GCTCGTCATCATTGCCTATGTGTATGCGGATAAATTCACATTGGCCGGTATGGGTGAAAGCTTTTCTGTCAACCTCGGCC
TCAAGTACAAACGGGTTGTGAACATCGGGCTCATTATCGTGTCCCTGATCACGTCCCTTGTCATTTTGACTGTCGGTATG
CTGCCGTTTCTCGGCTTAATCATCCCGAATATTGTCTCGATTTACAGAGGAGACAATCTGAAGAGCAGCCTGCCGCATAC
TGCGCTGTTGGGAGCGGTGTTTGTGCTGTTTTGCGATATATTGGGCAGAGTCATTATCTTCCCTTACGAAATCTCGATTG
GCCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCCTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A292GGZ9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.532

100

0.525