Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   P3G65_RS10275 Genome accession   NZ_CP120417
Coordinates   1975653..1976900 (-) Length   415 a.a.
NCBI ID   WP_019335277.1    Uniprot ID   -
Organism   Lactococcus sp. bn62     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1970653..1981900
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P3G65_RS10260 - 1972184..1972828 (-) 645 Protein_1986 PolC-type DNA polymerase III N-terminal domain-containing protein -
  P3G65_RS10265 (P3G65_10260) - 1972934..1973308 (-) 375 WP_019291560.1 hypothetical protein -
  P3G65_RS10270 (P3G65_10265) - 1973776..1975626 (-) 1851 WP_019291561.1 proline--tRNA ligase -
  P3G65_RS10275 (P3G65_10270) eeP 1975653..1976900 (-) 1248 WP_019335277.1 RIP metalloprotease RseP Regulator
  P3G65_RS10280 (P3G65_10275) - 1977077..1977871 (-) 795 WP_019291563.1 phosphatidate cytidylyltransferase -
  P3G65_RS10285 (P3G65_10280) - 1977868..1978605 (-) 738 WP_019291564.1 isoprenyl transferase -
  P3G65_RS10290 (P3G65_10285) yajC 1978805..1979140 (-) 336 WP_014025468.1 preprotein translocase subunit YajC -
  P3G65_RS10295 (P3G65_10290) - 1979215..1979862 (-) 648 WP_019291565.1 DNA alkylation repair protein -
  P3G65_RS10300 (P3G65_10295) rlmH 1979859..1980338 (-) 480 WP_019291566.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  P3G65_RS10305 (P3G65_10300) htrA 1980642..1981859 (+) 1218 WP_019291567.1 S1C family serine protease Regulator

Sequence


Protein


Download         Length: 415 a.a.        Molecular weight: 45075.48 Da        Isoelectric Point: 5.8072

>NTDB_id=805573 P3G65_RS10275 WP_019335277.1 1975653..1976900(-) (eeP) [Lactococcus sp. bn62]
MIQTLVTFIIVFGIIVVVHEYGHLFFAKRAGILVREFSIGMGPKIFAHQAKDGTFYSIRILPLGGYVRMAGWGDDTTEIK
KGTPASLMIVENQVVKINLSERVTLENSVPMLVTEYDFEEALFIEGEVFGETKRYSVDHDATIIEADGTELRIAPRDVQY
QSASVLGKILTNFAGPLNNFILGIIAFIIITFMQGGVPSNTNQIGQVQSGTPAYSAGLQSKDKIQAVNGEKTNNWEEVVQ
RIGANDGSEIKLDIERAGATKTLELKPEKIDGRYRIGITQTIKTGFLDKLTGGFTQAANATTLIFKALGNLIAQPSLDKL
GGPVAIYDLSGQAAREGLVSVIALLAMLSINLGIVNLIPIPVLDGGKIVLNIVEALRGKPLSQEKEGILTLVGLVFMVVL
MIAVTWNDILRAFIR

Nucleotide


Download         Length: 1248 bp        

>NTDB_id=805573 P3G65_RS10275 WP_019335277.1 1975653..1976900(-) (eeP) [Lactococcus sp. bn62]
TTGATTCAAACATTGGTAACATTTATCATTGTCTTTGGTATTATTGTTGTTGTACATGAGTATGGTCATCTATTCTTTGC
TAAGCGCGCGGGGATTTTAGTCCGCGAGTTTTCCATTGGAATGGGCCCCAAAATTTTTGCACATCAAGCCAAAGATGGCA
CGTTTTATAGCATTCGTATACTTCCTCTTGGAGGTTATGTCCGCATGGCGGGCTGGGGCGATGATACAACGGAAATAAAA
AAAGGAACCCCGGCATCTTTGATGATTGTTGAAAATCAGGTGGTTAAAATTAATCTTTCTGAGCGGGTGACTTTGGAAAA
TAGTGTCCCCATGCTGGTCACTGAATACGATTTTGAAGAAGCACTTTTCATCGAAGGAGAAGTTTTTGGTGAAACAAAAC
GTTATTCAGTTGACCATGATGCAACAATTATCGAAGCGGATGGCACGGAACTTCGTATCGCTCCACGCGACGTACAATAT
CAAAGTGCCAGCGTTCTCGGCAAGATTTTAACAAATTTTGCTGGTCCTTTAAATAACTTTATTTTAGGGATTATAGCTTT
TATTATCATCACTTTTATGCAAGGTGGTGTACCTTCTAATACAAATCAAATCGGACAAGTCCAATCTGGCACCCCTGCTT
ATTCGGCAGGTTTACAGTCAAAGGATAAAATCCAAGCAGTCAATGGTGAAAAAACCAATAACTGGGAAGAAGTTGTCCAA
AGGATCGGTGCAAATGATGGCAGTGAAATCAAGCTGGATATCGAACGTGCAGGTGCGACGAAGACACTGGAGCTCAAGCC
AGAAAAAATTGACGGAAGATACCGCATTGGTATCACTCAAACAATCAAAACTGGCTTTTTAGATAAGCTAACGGGTGGCT
TTACTCAGGCTGCTAACGCAACAACGTTGATATTTAAAGCTTTAGGTAACCTCATTGCACAGCCAAGTCTTGATAAACTT
GGTGGACCCGTTGCCATTTATGATTTAAGTGGGCAAGCAGCCCGAGAAGGTCTAGTATCTGTTATCGCTTTACTTGCCAT
GCTCTCAATTAATCTGGGAATCGTAAATTTAATCCCAATCCCCGTCCTTGACGGAGGGAAAATTGTCCTCAATATTGTTG
AGGCCCTACGAGGCAAACCACTTTCACAAGAAAAAGAAGGAATCTTAACACTTGTTGGTCTTGTCTTTATGGTGGTCTTG
ATGATTGCTGTGACTTGGAATGATATCCTCCGAGCCTTTATTAGATAA

Domains


Predicted by InterproScan.

(204-256)

(7-400)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

56.086

100

0.566

  eeP Streptococcus thermophilus LMD-9

55.847

100

0.564