Detailed information NTG0805503

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: PVE91_RS14670
• Genome accession: NZ_CP120400
• Coordinates: 3204762..3206135 (+)
• Length: 457 a.a.
• NCBI ID: WP_053517026.1
• Uniprot ID: A0A4Q1CWL9
• Organism: Stenotrophomonas maltophilia strain LH-B2
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 3199762..3211135

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PVE91_RS14655	sucD	3200688..3201563 (-)	876	WP_005418610.1	succinate--CoA ligase subunit alpha	-
PVE91_RS14660	sucC	3201588..3202757 (-)	1170	WP_005418614.1	ADP-forming succinate--CoA ligase subunit beta	-
PVE91_RS14665	-	3203088..3204707 (+)	1620	WP_053517024.1	ATP-binding protein	-
PVE91_RS14670	pilR	3204762..3206135 (+)	1374	WP_053517026.1	sigma-54 dependent transcriptional regulator	Regulator
PVE91_RS14675	pilB	3206205..3207932 (-)	1728	WP_053517028.1	type IV-A pilus assembly ATPase PilB	Machinery gene
PVE91_RS14680	-	3207944..3210991 (-)	3048	WP_277381036.1	fused MFS/spermidine synthase	-

Sequence

Protein

• Length: 457 a.a.
• Molecular weight: 49678.08 Da
• Isoelectric Point: 6.5140

>NTDB_id=805503 PVE91_RS14670 WP_053517026.1 3204762..3206135(+) (pilR) [Stenotrophomonas maltophilia strain LH-B2]
MNETRSALVVDDERDIRELLVLTLGRMGLRISTAANLAEARELLASNPYDLCITDMRLPDGNGIELVSEIAQHYPRTPVA
MITAFGSMDLAVEALKAGAFDFVSKPVDIAVLRGLVKHALELNNSERPVPGPVAEQGARLLGNSPAMDVLRATIGKVARS
QAPVYILGESGVGKELVARTIHTQGARAAGPFVPVNCGAIPGELMESEFFGHRKGSFSGAHADKPGLFQAAHGGTLFLDE
VAELPLQMQVKLLRAIQEKSVRAVGAASEEPVDVRILSATHKDLAELVEDGRFRHDLYYRINVIELKVPPLRERRQDLPE
LAAAVLARLARSHGRTTPLLAPSALEALAQYAFPGNVRELENILERALALAEEDRIGVDDLRLPQHAPRMPGNGTAAEAV
VDLQPGSAALPSYIEQLERSAIQRALEENRWNKTRTAAQLGITFRALRYKLKKLGME

Nucleotide

• Length: 1374 bp

>NTDB_id=805503 PVE91_RS14670 WP_053517026.1 3204762..3206135(+) (pilR) [Stenotrophomonas maltophilia strain LH-B2]
ATGAACGAAACCCGCAGCGCCCTCGTCGTCGACGACGAACGCGACATCCGCGAACTGCTGGTGCTGACGCTCGGCCGCAT
GGGGCTGCGCATCAGTACTGCAGCCAACCTCGCCGAAGCGCGCGAGCTGCTGGCCAGCAATCCTTATGACCTGTGCATCA
CCGACATGCGCCTGCCGGATGGCAACGGCATCGAGCTGGTCAGCGAGATCGCCCAGCACTACCCGCGCACACCGGTGGCG
ATGATCACCGCCTTCGGCAGCATGGATCTGGCAGTGGAAGCCCTGAAGGCGGGCGCCTTCGACTTCGTCAGCAAGCCGGT
GGACATCGCCGTACTGCGCGGACTGGTCAAGCACGCGCTGGAACTGAACAACAGCGAGCGGCCCGTACCGGGCCCCGTCG
CCGAACAGGGCGCCCGGCTGCTCGGCAATTCGCCGGCGATGGACGTGTTGCGTGCCACCATCGGCAAAGTCGCGCGCAGC
CAGGCCCCGGTCTACATCCTCGGCGAATCCGGCGTCGGCAAGGAACTGGTCGCGCGGACCATCCACACCCAGGGGGCACG
TGCTGCCGGGCCGTTCGTGCCGGTCAACTGCGGCGCGATTCCCGGCGAACTGATGGAGAGCGAGTTCTTCGGCCACCGCA
AGGGCAGCTTCAGCGGCGCCCACGCCGACAAGCCCGGCCTGTTCCAGGCCGCCCATGGTGGCACCCTGTTCCTGGATGAG
GTCGCCGAGCTGCCGCTGCAGATGCAGGTGAAGCTGTTGCGCGCGATCCAGGAGAAGTCGGTGCGCGCGGTGGGTGCGGC
CAGCGAGGAACCGGTCGATGTGCGCATCCTGTCGGCCACCCACAAGGATCTGGCCGAGCTGGTCGAGGACGGCCGCTTCC
GCCACGACCTGTACTACCGCATCAATGTGATCGAACTGAAGGTGCCGCCGCTGCGCGAACGCCGCCAGGATCTGCCGGAG
CTGGCCGCTGCCGTGCTGGCGCGGCTGGCCCGCAGCCACGGCCGCACCACGCCGCTGCTCGCGCCCTCGGCGCTGGAGGC
ACTGGCGCAGTACGCCTTCCCCGGCAACGTGCGCGAACTGGAGAACATCCTTGAGCGCGCGCTGGCCCTGGCCGAGGAAG
ACCGCATCGGTGTCGACGATCTGCGCCTGCCGCAACACGCCCCCCGCATGCCCGGCAACGGCACGGCCGCCGAAGCCGTG
GTCGATCTGCAGCCGGGCAGTGCCGCCCTGCCCTCGTACATCGAACAGCTCGAACGCAGCGCCATCCAGCGCGCGCTGGA
AGAAAACCGCTGGAACAAGACCCGTACCGCCGCGCAGCTGGGCATCACCTTCCGCGCGCTGCGCTACAAGCTGAAGAAGC
TGGGCATGGAGTAA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (8-115)

• Sigma-54 interaction domain (Sigma54_activat) (140-306)

• Bacterial regulatory protein, Fis family (HTH_8) (414-454)

3D structure

• AlphaFold DB: A0A4Q1CWL9

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	63.355	99.125	0.628
pilR	Acinetobacter baumannii strain A118	47.835	100	0.484