Detailed information NTG0804167

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: RJD14_RS07365
• Genome accession: NZ_CP134493
• Coordinates: 1642765..1644051 (-)
• Length: 428 a.a.
• NCBI ID: WP_184592647.1
• Uniprot ID: A0ABZ1NRP8
• Organism: Streptomyces sp. CGMCC 4.1456
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 1637765..1649051

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RJD14_RS07355 (RJD14_07355)	-	1638967..1641597 (-)	2631	WP_311125683.1	valine--tRNA ligase	-
RJD14_RS07360 (RJD14_07360)	-	1641736..1642701 (+)	966	WP_311125684.1	hypothetical protein	-
RJD14_RS07365 (RJD14_07365)	clpX	1642765..1644051 (-)	1287	WP_184592647.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
RJD14_RS07370 (RJD14_07370)	clpP	1644231..1644938 (-)	708	WP_311125685.1	ATP-dependent Clp protease proteolytic subunit	Regulator
RJD14_RS07375 (RJD14_07375)	-	1645048..1645653 (-)	606	WP_311130292.1	ATP-dependent Clp protease proteolytic subunit	-
RJD14_RS07380 (RJD14_07380)	tig	1646036..1647421 (-)	1386	WP_311125686.1	trigger factor	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46855.63 Da
• Isoelectric Point: 4.7360

>NTDB_id=804167 RJD14_RS07365 WP_184592647.1 1642765..1644051(-) (clpX) [Streptomyces sp. CGMCC 4.1456]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEA
AKKALSVAVYNHYKRVQAGENGGANGRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKIIESRAGAKGIGFGAQIRSKREMESKDQFQEVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILIEPRNALVKQYERLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLQGVMYEVPSRKDVARVVIT
ADVVQSNVNPTLIPRDARGRGPGEQKTA

Nucleotide

• Length: 1287 bp

>NTDB_id=804167 RJD14_RS07365 WP_184592647.1 1642765..1644051(-) (clpX) [Streptomyces sp. CGMCC 4.1456]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGCGGCAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGGCCCGGTGTGTACATCTGCGACGAGTGCATCGACCTCTGCAACGAGATCATCGAGGAAGAACTGGCGGAGACCA
GCGAGGTCCGCTGGGAGGAACTCCCGAAGCCCCGCGAGATCTACGAGTTCCTCGAGGGGTACGTGGTCGGCCAGGAGGCC
GCCAAGAAGGCCCTGTCCGTAGCGGTGTACAACCACTACAAGCGCGTCCAGGCCGGTGAGAACGGCGGGGCGAACGGCCG
TGACGACGCCATCGAGTTGGCGAAGTCCAACATCCTCCTCCTCGGCCCCACGGGCTCCGGGAAGACCCTCCTCGCGCAGA
CCCTCGCGCGCATGCTGAACGTCCCCTTCGCGATCGCCGACGCCACGGCGCTCACGGAGGCGGGCTACGTCGGCGAGGAC
GTCGAGAACATCCTCCTCAAGCTGATCCAGGCCGCCGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
TGAGATCGACAAGGTCGCGAGGAAGAGTGAAAACCCGTCGATCACGCGCGACGTGAGCGGCGAGGGCGTCCAGCAGGCCC
TGCTGAAGATCCTCGAGGGCACCACGGCCTCGGTCCCGCCGCAGGGCGGCCGTAAGCACCCCCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTGTTCATCGTGGGCGGTGCCTTCGCCGGACTGGAGAAGATCATCGAGTCCCGGGCGGGTGC
CAAGGGCATCGGCTTCGGCGCGCAGATCCGCTCCAAGCGCGAGATGGAGTCCAAGGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTCAAGTTCGGCATGATCCCCGAGTTCATCGGCCGTCTGCCGGTCATCACCTCGGTCCACAACCTCGACCGC
GAGGCCCTGCTGCAGATCCTCATCGAGCCGCGCAACGCACTCGTCAAGCAGTACGAGCGTCTCTTCGAACTGGACGGCGT
GGAGCTGGACTTCGAGCGCGAGGCCCTCGAGGCCATCGCCGACCAGGCGATCCTCCGCCAGACCGGCGCGCGTGGCCTGC
GGGCCATCATGGAGGAGGTCCTCCAAGGCGTGATGTACGAGGTCCCGTCCCGCAAGGACGTGGCCCGGGTCGTCATCACG
GCGGACGTCGTCCAGTCGAACGTCAACCCGACGCTGATCCCGCGGGATGCGCGGGGGCGGGGGCCGGGGGAGCAGAAGAC
GGCCTAG

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	62.935	93.925	0.591
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.258	96.028	0.521