Detailed information NTG0804069

Bioinformatically predicted

Overview

• Name: comGF/cglF
• Type: Machinery gene
• Locus tag: RJW53_RS00805
• Genome accession: NZ_CP134488
• Coordinates: 125954..126388 (+)
• Length: 144 a.a.
• NCBI ID: WP_074389248.1
• Uniprot ID: -
• Organism: Streptococcus suis strain NLS50
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 120954..131388

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RJW53_RS00770 (RJW53_00770)	-	121696..122061 (+)	366	WP_023369079.1	DUF1033 family protein	-
RJW53_RS00775 (RJW53_00775)	-	122096..123046 (-)	951	Protein_119	S66 peptidase family protein	-
RJW53_RS00780 (RJW53_00780)	comGA	123132..124082 (+)	951	WP_044760311.1	competence type IV pilus ATPase ComGA	Machinery gene
RJW53_RS00785 (RJW53_00785)	comGB	123994..125031 (+)	1038	WP_257116212.1	competence type IV pilus assembly protein ComGB	Machinery gene
RJW53_RS00790 (RJW53_00790)	comGC	125033..125314 (+)	282	WP_074389246.1	competence type IV pilus major pilin ComGC	Machinery gene
RJW53_RS00795 (RJW53_00795)	comGD	125295..125702 (+)	408	WP_074389247.1	competence type IV pilus minor pilin ComGD	Machinery gene
RJW53_RS00800 (RJW53_00800)	comGE	125674..125967 (+)	294	WP_024413203.1	competence type IV pilus minor pilin ComGE	Machinery gene
RJW53_RS00805 (RJW53_00805)	comGF/cglF	125954..126388 (+)	435	WP_074389248.1	competence type IV pilus minor pilin ComGF	Machinery gene
RJW53_RS00810 (RJW53_00810)	comGG	126366..126776 (+)	411	WP_074392769.1	competence type IV pilus minor pilin ComGG	-
RJW53_RS00815 (RJW53_00815)	-	127257..127682 (-)	426	WP_226319165.1	ArpU family phage packaging/lysis transcriptional regulator	-
RJW53_RS00820 (RJW53_00820)	-	128006..128581 (-)	576	WP_074392204.1	hypothetical protein	-
RJW53_RS00825 (RJW53_00825)	-	128602..128775 (-)	174	WP_171840772.1	hypothetical protein	-
RJW53_RS00830 (RJW53_00830)	-	129089..130525 (-)	1437	WP_257116214.1	phage/plasmid primase, P4 family	-

Sequence

Protein

• Length: 144 a.a.
• Molecular weight: 16432.74 Da
• Isoelectric Point: 6.9832

>NTDB_id=804069 RJW53_RS00805 WP_074389248.1 125954..126388(+) (comGF/cglF) [Streptococcus suis strain NLS50]
MLKSKIPAFTLLECLVALVILSGSLLVFEGLSKLLVQEAHYQGQTVQKEWLVFSSQLRSEWDQAELVKVENGKVYVNKGE
QALAFGKSRSDDFRKTNDRGQGYQPMLYQVDSAAVSQENQLVRIDFNFKNGEERTFIYAFKEKS

Nucleotide

• Length: 435 bp

>NTDB_id=804069 RJW53_RS00805 WP_074389248.1 125954..126388(+) (comGF/cglF) [Streptococcus suis strain NLS50]
TTGTTAAAAAGTAAAATTCCTGCCTTTACTCTCTTGGAATGCTTGGTAGCCTTAGTCATCCTATCAGGAAGTCTTCTGGT
CTTTGAAGGCTTGTCAAAACTGCTGGTCCAAGAAGCGCATTACCAAGGTCAGACCGTTCAAAAGGAATGGTTGGTCTTCT
CTAGTCAATTGCGGTCGGAGTGGGACCAGGCTGAATTGGTCAAGGTTGAAAATGGCAAGGTCTATGTCAACAAAGGCGAA
CAGGCTTTGGCCTTTGGCAAGTCACGGTCGGATGATTTTCGGAAAACAAATGACAGGGGACAGGGTTACCAGCCCATGCT
CTATCAGGTGGATAGCGCAGCCGTTTCCCAAGAAAACCAGCTGGTGCGCATCGACTTTAACTTTAAAAACGGAGAGGAGC
GGACCTTTATCTATGCTTTTAAAGAAAAAAGTTAA

Domains

Predicted by InterProScan.

• Putative Competence protein ComGF (ComGF) (37-134)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF/cglF	Streptococcus pneumoniae Rx1	52.482	97.917	0.514
comGF/cglF	Streptococcus pneumoniae D39	52.482	97.917	0.514
comGF/cglF	Streptococcus pneumoniae R6	52.482	97.917	0.514
comGF/cglF	Streptococcus pneumoniae TIGR4	52.482	97.917	0.514
comGF	Streptococcus mutans UA140	50	100	0.5
comGF	Streptococcus mutans UA159	49.306	100	0.493
comGF/cglF	Streptococcus mitis NCTC 12261	52.985	93.056	0.493
comGF/cglF	Streptococcus mitis SK321	50	93.056	0.465
comGF	Lactococcus lactis subsp. cremoris KW2	46.099	97.917	0.451