Detailed information NTG0803724

Bioinformatically predicted

Overview

• Name: uvrB
• Type: Machinery gene
• Locus tag: RJW56_RS05920
• Genome accession: NZ_CP134472
• Coordinates: 1209939..1211924 (+)
• Length: 661 a.a.
• NCBI ID: WP_024394617.1
• Uniprot ID: -
• Organism: Streptococcus suis strain 1522228
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1204939..1216924

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RJW56_RS05905 (RJW56_05905)	-	1206256..1206747 (+)	492	WP_024394619.1	GNAT family N-acetyltransferase	-
RJW56_RS05910 (RJW56_05910)	-	1206803..1207543 (-)	741	WP_002940438.1	amino acid ABC transporter ATP-binding protein	-
RJW56_RS05915 (RJW56_05915)	-	1207543..1209741 (-)	2199	WP_024394618.1	ABC transporter substrate-binding protein/permease	-
RJW56_RS05920 (RJW56_05920)	uvrB	1209939..1211924 (+)	1986	WP_024394617.1	excinuclease ABC subunit UvrB	Machinery gene
RJW56_RS05925 (RJW56_05925)	-	1212194..1213729 (+)	1536	WP_311063403.1	G5 domain-containing protein	-

Sequence

Protein

• Length: 661 a.a.
• Molecular weight: 75578.55 Da
• Isoelectric Point: 4.5960

>NTDB_id=803724 RJW56_RS05920 WP_024394617.1 1209939..1211924(+) (uvrB) [Streptococcus suis strain 1522228]
MINRNTENQFKLVSKYSPSGDQPQAIETLVDNIEGGEKAQILMGATGTGKTYTMSQVIARVNKPTLVIAHNKTLAGQLYS
EFKEFFPENAVEYFVSYYDYYQPEAYVPSSDTYIEKDSSVNDEIDKLRHSATSALLERNDVIVVASVSCIYGLGSPKEYS
DSVVSLRPGQEISRDQLLNSLVDIQFERNDIDFQRGRFRVRGDVVEIFPASRDEHAFRVEFFGDEIDRIREIESLTGKVL
GDVDHLAIFPATHFVTNDDHMETAIAKIQAELEEQLKVFEAEGKLLEAQRLKQRTDYDIEMLREIGYTNGVENYSRHMDG
RSEGEPPYTLLDFFPEDYLIMIDESHMTMGQIKGMYNGDRSRKEMLVNYGFRLPSALDNRPLRREEFESHVHQIVYVSAT
PGDYEMEQTDTVVEQIIRPTGLLDPEVEVRPTMGQMDDLLGEINARVEKGERTFITTLTKKMAEDLTDYLKEMGVKVKYM
HSDIKTLERTEIIRDLRLGVFDVLIGINLLREGIDVPEVSLVAILDADKEGFLRNERGLIQTIGRAARNSEGHVIMYADK
VTESMRKAMDETARRRQIQMAYNEEHGIIPQTIKKEIRDLISVTKAVTQDKEEVVDFNALNKDERKAMIKKLEGQMQEAA
EVLDFELAAQIRDMVIELKNM

Nucleotide

• Length: 1986 bp

>NTDB_id=803724 RJW56_RS05920 WP_024394617.1 1209939..1211924(+) (uvrB) [Streptococcus suis strain 1522228]
ATGATCAATCGAAATACTGAAAACCAATTTAAACTTGTATCTAAATACTCACCGTCTGGTGATCAGCCCCAAGCCATTGA
AACCTTGGTTGATAACATAGAGGGGGGCGAAAAAGCCCAGATTCTCATGGGGGCGACTGGTACGGGCAAGACCTACACCA
TGAGTCAGGTCATTGCCCGTGTCAATAAGCCCACTCTAGTCATCGCCCACAACAAGACTCTAGCTGGTCAGCTTTACAGC
GAGTTCAAGGAATTCTTCCCAGAAAATGCGGTCGAATACTTCGTATCTTACTATGATTACTACCAGCCAGAGGCCTATGT
ACCGTCTAGCGATACCTATATCGAGAAGGACAGTTCGGTCAATGATGAGATTGACAAACTCCGTCACTCAGCGACGTCAG
CTCTTCTCGAACGAAATGATGTCATCGTTGTGGCTTCGGTTTCCTGTATCTACGGTTTGGGATCGCCCAAGGAATATTCA
GATAGTGTGGTTAGTCTGCGACCCGGCCAGGAGATTTCCCGAGACCAGTTGCTCAATTCCTTGGTAGATATCCAGTTTGA
GCGCAACGACATCGACTTCCAACGGGGACGCTTCCGTGTACGTGGAGATGTGGTGGAGATTTTCCCAGCTTCTCGTGATG
AACACGCCTTCCGTGTGGAGTTTTTCGGGGATGAAATTGACCGCATTCGTGAGATTGAAAGCCTGACAGGTAAGGTTTTG
GGCGATGTGGACCACTTGGCGATTTTCCCTGCCACCCACTTCGTGACCAACGATGACCATATGGAAACGGCTATTGCCAA
GATTCAGGCGGAACTGGAAGAGCAGCTCAAGGTCTTTGAGGCAGAAGGAAAACTCTTAGAAGCTCAGCGATTGAAACAAC
GGACCGACTACGACATCGAGATGCTTCGGGAAATAGGTTACACCAACGGAGTTGAGAACTATTCACGACACATGGACGGG
CGAAGCGAGGGCGAGCCTCCGTACACACTGCTGGACTTTTTCCCTGAAGACTACCTGATTATGATTGACGAGAGCCACAT
GACCATGGGGCAGATTAAGGGGATGTACAATGGTGACCGCTCACGCAAGGAGATGTTGGTCAACTATGGCTTCCGCCTCC
CGAGTGCACTGGACAATCGTCCGCTGCGCAGGGAAGAATTTGAGAGCCATGTCCACCAGATTGTCTATGTATCTGCGACG
CCGGGTGACTATGAAATGGAGCAGACCGATACCGTTGTCGAGCAGATCATTCGGCCGACAGGGCTTCTGGATCCAGAAGT
GGAAGTCCGTCCAACCATGGGCCAAATGGATGACCTCTTGGGCGAAATCAATGCCCGTGTTGAGAAAGGTGAGCGGACCT
TTATCACTACCCTGACCAAGAAAATGGCAGAGGACTTGACTGACTACCTGAAAGAAATGGGCGTCAAGGTCAAGTATATG
CACTCGGATATCAAGACCTTGGAGCGTACGGAGATTATTCGTGATTTGCGTTTGGGCGTCTTTGATGTCTTGATAGGGAT
TAACCTCTTGCGTGAAGGGATTGACGTGCCAGAAGTCAGTCTGGTTGCTATCTTAGACGCAGACAAGGAAGGCTTCCTCC
GTAATGAGCGTGGACTCATCCAGACAATTGGTCGTGCGGCCCGTAACTCTGAAGGTCATGTCATTATGTATGCGGACAAG
GTCACCGAGTCCATGCGCAAGGCTATGGACGAAACAGCCCGCCGCCGTCAAATCCAGATGGCTTATAATGAAGAACATGG
TATTATCCCACAAACTATCAAGAAGGAAATCCGTGACCTGATTAGCGTAACCAAGGCTGTCACTCAGGACAAGGAAGAAG
TGGTGGACTTCAATGCCCTCAACAAAGACGAACGCAAGGCTATGATCAAGAAACTGGAAGGTCAAATGCAGGAAGCTGCA
GAAGTGCTTGACTTTGAACTGGCAGCCCAGATTCGTGATATGGTCATCGAGTTGAAGAATATGTAG

Domains

Predicted by InterProScan.

• Ultra-violet resistance protein B (UvrB) (556-598)

• Type III restriction enzyme, res subunit (ResIII) (20-143)

• UvrB interaction domain (UvrB_inter) (164-254)

• UvrB/uvrC motif (UVR) (626-660)

• Helicase conserved C-terminal domain (Helicase_C) (445-549)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrB	Streptococcus pneumoniae R6	91.074	100	0.911
uvrB	Streptococcus pneumoniae D39	91.074	100	0.911
uvrB	Streptococcus pneumoniae TIGR4	90.923	100	0.909